Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   L5465_RS09230 Genome accession   NZ_CP091596
Coordinates   1810039..1810674 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain Nord4-2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1805039..1815674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L5465_RS09210 (L5465_09210) - 1805116..1805931 (+) 816 WP_000011157.1 DsbC family protein -
  L5465_RS09215 (L5465_09215) - 1806176..1807477 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  L5465_RS09220 (L5465_09220) thrC 1807533..1808672 (+) 1140 WP_000063593.1 threonine synthase -
  L5465_RS09225 (L5465_09225) pbpG 1808780..1809826 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  L5465_RS09230 (L5465_09230) letA 1810039..1810674 (+) 636 WP_000633799.1 response regulator Regulator
  L5465_RS09235 (L5465_09235) pilS 1810685..1812253 (+) 1569 WP_001160341.1 sensor histidine kinase Regulator
  L5465_RS09240 (L5465_09240) - 1812278..1813699 (+) 1422 WP_000840547.1 sigma-54-dependent transcriptional regulator -
  L5465_RS09245 (L5465_09245) - 1813703..1814887 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=562086 L5465_RS09230 WP_000633799.1 1810039..1810674(+) (letA) [Acinetobacter baumannii strain Nord4-2]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=562086 L5465_RS09230 WP_000633799.1 1810039..1810674(+) (letA) [Acinetobacter baumannii strain Nord4-2]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55