Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   LVJ79_RS03335 Genome accession   NZ_CP091518
Coordinates   619737..620441 (-) Length   234 a.a.
NCBI ID   WP_003785579.1    Uniprot ID   F5S586
Organism   Kingella kingae strain 4177/66     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 614737..625441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LVJ79_RS03300 (LVJ79_03300) - 614786..615073 (-) 288 WP_155114346.1 hypothetical protein -
  LVJ79_RS03305 (LVJ79_03305) pgl 615096..615794 (+) 699 WP_003785563.1 6-phosphogluconolactonase -
  LVJ79_RS03310 (LVJ79_03310) - 615775..616779 (+) 1005 WP_003785566.1 glucokinase -
  LVJ79_RS03315 (LVJ79_03315) - 616758..616940 (-) 183 WP_003785569.1 hypothetical protein -
  LVJ79_RS03320 (LVJ79_03320) aroG 616937..617989 (-) 1053 WP_003785571.1 3-deoxy-7-phosphoheptulonate synthase AroG -
  LVJ79_RS03325 (LVJ79_03325) - 618356..618718 (-) 363 WP_003789582.1 hypothetical protein -
  LVJ79_RS03330 (LVJ79_03330) - 618848..619675 (-) 828 WP_003785577.1 undecaprenyl-diphosphate phosphatase -
  LVJ79_RS03335 (LVJ79_03335) dsbA2 619737..620441 (-) 705 WP_003785579.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  LVJ79_RS03340 (LVJ79_03340) - 620480..621340 (-) 861 WP_003785581.1 SPOR domain-containing protein -
  LVJ79_RS03345 (LVJ79_03345) - 621405..622199 (-) 795 WP_003785583.1 3'-5' exonuclease -
  LVJ79_RS03350 (LVJ79_03350) - 622350..623165 (+) 816 WP_003785588.1 DsbC family protein -
  LVJ79_RS03355 (LVJ79_03355) - 623365..623616 (+) 252 WP_003785591.1 BolA family protein -
  LVJ79_RS03360 (LVJ79_03360) - 623698..624606 (+) 909 WP_003785593.1 tyrosine-type recombinase/integrase -
  LVJ79_RS03365 (LVJ79_03365) - 624603..625046 (+) 444 WP_003785594.1 CopD family copper resistance protein -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 25703.41 Da        Isoelectric Point: 8.4456

>NTDB_id=561758 LVJ79_RS03335 WP_003785579.1 619737..620441(-) (dsbA2) [Kingella kingae strain 4177/66]
MLNKKSIAAALMALFVSVPALAATEGVDYKLAEVEVAPLQKDKIEVTEFFAYWCPHCYDLEPVIARHIKTFASDTVFRAE
HIVWDKQRDFGFARLAAAVKQSGTKIQANPFIFEAVIKQKVNLGNSAVLSQWLKAQTAFDGSKVQAAFDSFSNATQATQM
ESWTDQYAISGTPTVIVGGKYQVIFNNGYETGMTTIDELIKKVREERGMKAPAPKAATTPTHSFGASLVNSVNR

Nucleotide


Download         Length: 705 bp        

>NTDB_id=561758 LVJ79_RS03335 WP_003785579.1 619737..620441(-) (dsbA2) [Kingella kingae strain 4177/66]
ATGTTGAATAAAAAAAGTATTGCCGCCGCATTGATGGCGTTATTTGTATCTGTTCCTGCGTTGGCAGCCACCGAAGGCGT
GGACTATAAACTTGCCGAAGTGGAAGTTGCACCCTTGCAAAAAGACAAAATTGAAGTAACCGAATTTTTTGCATACTGGT
GTCCACATTGCTATGACCTAGAACCCGTTATTGCACGTCATATCAAAACCTTTGCCAGCGACACCGTATTCCGCGCGGAA
CACATTGTGTGGGATAAACAACGCGATTTTGGTTTTGCACGTCTTGCCGCAGCGGTGAAACAATCGGGTACAAAAATACA
AGCCAACCCATTTATTTTTGAAGCTGTAATTAAACAAAAAGTCAATTTAGGCAACTCAGCCGTTTTGTCGCAATGGCTCA
AAGCACAAACCGCATTCGATGGCAGCAAAGTGCAGGCTGCTTTTGATTCGTTCAGCAACGCCACACAAGCCACACAAATG
GAATCATGGACAGACCAATACGCCATTTCTGGCACACCAACCGTGATTGTGGGCGGCAAATACCAAGTTATTTTCAACAA
CGGCTACGAAACAGGCATGACCACGATTGACGAACTCATCAAAAAAGTACGCGAAGAACGTGGCATGAAAGCCCCAGCAC
CCAAAGCCGCAACCACACCAACTCACAGCTTTGGCGCAAGTTTGGTTAATAGCGTAAATCGTTAA

Domains

Predicted by InterProScan.

Thioredoxin (Thioredoxin_4)

(41-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5S586

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

53.005

78.205

0.415
  dsbA1 Neisseria meningitidis MC58

48.649

79.06

0.385