Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   PA257_RS02560 Genome accession   NZ_AP014651
Coordinates   536488..536895 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain NCGM257     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 531488..541895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PA257_RS02530 (PA257_0537) - 531536..532540 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  PA257_RS02535 (PA257_0538) pyrR 532564..533076 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PA257_RS02540 (PA257_0539) ruvX 533188..533622 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  PA257_RS02545 (PA257_0540) - 533622..534191 (-) 570 WP_033991523.1 YqgE/AlgH family protein -
  PA257_RS02550 (PA257_0541) - 534240..535133 (-) 894 WP_003084580.1 TonB family protein -
  PA257_RS02555 (PA257_0542) gshB 535280..536233 (-) 954 WP_003100943.1 glutathione synthase -
  PA257_RS02560 (PA257_0543) pilG 536488..536895 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  PA257_RS02565 (PA257_0544) pilH 536942..537307 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  PA257_RS02570 (PA257_0545) - 537358..537894 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  PA257_RS02575 (PA257_0546) pilJ 537979..540027 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  PA257_RS02580 (PA257_0547) pilK 540088..540963 (+) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=56105 PA257_RS02560 WP_003084583.1 536488..536895(+) (pilG) [Pseudomonas aeruginosa strain NCGM257]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=56105 PA257_RS02560 WP_003084583.1 536488..536895(+) (pilG) [Pseudomonas aeruginosa strain NCGM257]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment