Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   L2Z13_RS12250 Genome accession   NZ_CP091361
Coordinates   2538540..2539175 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain AB177-VUB     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2533540..2544175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z13_RS12235 (L2Z13_12235) - 2534327..2535511 (+) 1185 WP_000939111.1 S41 family peptidase -
  L2Z13_RS12240 (L2Z13_12240) - 2535515..2536936 (-) 1422 WP_031963979.1 sigma-54 dependent transcriptional regulator -
  L2Z13_RS12245 (L2Z13_12245) pilS 2536961..2538529 (-) 1569 WP_032050112.1 PAS domain-containing sensor histidine kinase Regulator
  L2Z13_RS12250 (L2Z13_12250) letA 2538540..2539175 (-) 636 WP_000633799.1 response regulator Regulator
  L2Z13_RS12255 (L2Z13_12255) pbpG 2539388..2540434 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  L2Z13_RS12260 (L2Z13_12260) thrC 2540543..2541682 (-) 1140 WP_000063596.1 threonine synthase -
  L2Z13_RS12265 (L2Z13_12265) - 2541738..2543039 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  L2Z13_RS12270 (L2Z13_12270) - 2543284..2544099 (-) 816 WP_029424462.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=560225 L2Z13_RS12250 WP_000633799.1 2538540..2539175(-) (letA) [Acinetobacter baumannii strain AB177-VUB]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=560225 L2Z13_RS12250 WP_000633799.1 2538540..2539175(-) (letA) [Acinetobacter baumannii strain AB177-VUB]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55