Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C663_RS01910 Genome accession   NC_020244
Coordinates   364993..365391 (-) Length   132 a.a.
NCBI ID   WP_015382736.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 359993..370391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS01885 (C663_0327) yckA 360563..361243 (-) 681 WP_015382730.1 amino acid ABC transporter permease -
  C663_RS01890 (C663_0328) yckB 361253..362116 (-) 864 WP_015482776.1 transporter substrate-binding domain-containing protein -
  C663_RS21175 - 362278..362475 (+) 198 WP_144052033.1 hypothetical protein -
  C663_RS01895 (C663_0330) yckC 362525..362956 (+) 432 WP_046340202.1 RDD family protein -
  C663_RS01900 (C663_0331) yckD 363038..363370 (+) 333 WP_015252849.1 YckD family protein -
  C663_RS01905 (C663_0332) bglC 363523..364956 (+) 1434 WP_015382735.1 6-phospho-beta-glucosidase -
  C663_RS01910 (C663_0333) nin/comJ 364993..365391 (-) 399 WP_015382736.1 DNA-entry nuclease inhibitor Regulator
  C663_RS01915 (C663_0334) nucA/comI 365418..365867 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  C663_RS01920 (C663_0335) tlpC 366033..367754 (-) 1722 WP_041517645.1 methyl-accepting chemotaxis protein TlpC -
  C663_RS01925 hxlB 367873..368443 (-) 571 Protein_341 6-phospho-3-hexuloisomerase -
  C663_RS01930 (C663_0338) hxlA 368449..369081 (-) 633 WP_015382740.1 3-hexulose-6-phosphate synthase -
  C663_RS01935 (C663_0339) hxlR 369313..369675 (+) 363 WP_015482783.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14937.92 Da        Isoelectric Point: 5.1448

>NTDB_id=55974 C663_RS01910 WP_015382736.1 364993..365391(-) (nin/comJ) [Bacillus subtilis XF-1]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDETIKKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYETKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=55974 C663_RS01910 WP_015382736.1 364993..365391(-) (nin/comJ) [Bacillus subtilis XF-1]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAACGATTAAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAACAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTCCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962

Multiple sequence alignment