Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KEF49_RS11575 Genome accession   NZ_CP073635
Coordinates   2322519..2323319 (-) Length   266 a.a.
NCBI ID   WP_045510705.1    Uniprot ID   A0AAP7TAW5
Organism   Bacillus amyloliquefaciens strain Ba13     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2317519..2328319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEF49_RS11545 (KEF49_11545) - 2318012..2318644 (+) 633 WP_212098433.1 helix-turn-helix domain-containing protein -
  KEF49_RS11550 (KEF49_11550) - 2318937..2319074 (+) 138 WP_014470646.1 hypothetical protein -
  KEF49_RS11555 (KEF49_11555) - 2319168..2320286 (+) 1119 WP_212101730.1 NADH-dependent flavin oxidoreductase -
  KEF49_RS11560 (KEF49_11560) - 2320413..2320625 (+) 213 WP_014470647.1 spore germination protein -
  KEF49_RS11565 (KEF49_11565) - 2320750..2320962 (+) 213 WP_013352823.1 spore germination protein -
  KEF49_RS11570 (KEF49_11570) alr 2321148..2322329 (+) 1182 WP_212098435.1 alanine racemase -
  KEF49_RS19805 - 2322390..2322524 (+) 135 WP_258415239.1 hypothetical protein -
  KEF49_RS11575 (KEF49_11575) spo0A 2322519..2323319 (-) 801 WP_045510705.1 sporulation transcription factor Spo0A Regulator
  KEF49_RS11580 (KEF49_11580) spoIVB 2323600..2324880 (-) 1281 WP_115997624.1 SpoIVB peptidase -
  KEF49_RS11585 (KEF49_11585) recN 2325044..2326774 (-) 1731 WP_115997625.1 DNA repair protein RecN Machinery gene
  KEF49_RS11590 (KEF49_11590) argR 2326806..2327255 (-) 450 WP_013352828.1 transcriptional regulator ArgR -
  KEF49_RS11595 (KEF49_11595) - 2327352..2328197 (-) 846 WP_065522788.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29572.07 Da        Isoelectric Point: 6.3903

>NTDB_id=559590 KEF49_RS11575 WP_045510705.1 2322519..2323319(-) (spo0A) [Bacillus amyloliquefaciens strain Ba13]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELAKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=559590 KEF49_RS11575 WP_045510705.1 2322519..2323319(-) (spo0A) [Bacillus amyloliquefaciens strain Ba13]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTTTCTTTGTTTAAAGATAAAAATCCCGATGTGCTCG
TTTTAGATATTATTATGCCGCATCTGGACGGTCTTGCGGTTTTGGAGCGCCTCCGGGAATCAGAACTTGCGAAGCAGCCG
AATGTCATCATGCTGACGGCATTCGGTCAAGAAGACGTTACGAAAAAAGCCGTCGATTTAGGTGCGTCTTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGCGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATCATCCGCAGTCAGCCTGAGCCGAAGCGGAAAAATCTTGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGCG
CCATCCGCCATGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGACTCCATTTCTTCGCTGTTCGGGTATACTGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCATA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97