Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   KEF49_RS05550 Genome accession   NZ_CP073635
Coordinates   1125663..1126319 (+) Length   218 a.a.
NCBI ID   WP_212100921.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain Ba13     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120663..1131319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEF49_RS05520 (KEF49_05520) oppF 1121192..1122109 (+) 918 WP_045506975.1 oligopeptide ABC transporter ATP-binding protein OppF -
  KEF49_RS05525 (KEF49_05525) - 1122217..1123404 (+) 1188 WP_212100918.1 putative glycoside hydrolase -
  KEF49_RS05530 (KEF49_05530) - 1123522..1124100 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  KEF49_RS05535 (KEF49_05535) spx 1124278..1124673 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  KEF49_RS05540 (KEF49_05540) - 1124731..1125387 (-) 657 WP_065981171.1 TerC family protein -
  KEF49_RS05545 (KEF49_05545) - 1125570..1125672 (+) 103 Protein_1040 hypothetical protein -
  KEF49_RS05550 (KEF49_05550) mecA 1125663..1126319 (+) 657 WP_212100921.1 adaptor protein MecA Regulator
  KEF49_RS05555 (KEF49_05555) - 1126470..1127630 (+) 1161 WP_212100924.1 competence protein CoiA family protein -
  KEF49_RS05560 (KEF49_05560) pepF 1127859..1129688 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  KEF49_RS05565 (KEF49_05565) - 1129724..1129891 (-) 168 WP_016938224.1 hypothetical protein -
  KEF49_RS05570 (KEF49_05570) spxH 1130176..1131078 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25996.80 Da        Isoelectric Point: 4.0863

>NTDB_id=559577 KEF49_RS05550 WP_212100921.1 1125663..1126319(+) (mecA) [Bacillus amyloliquefaciens strain Ba13]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREEKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=559577 KEF49_RS05550 WP_212100921.1 1125663..1126319(+) (mecA) [Bacillus amyloliquefaciens strain Ba13]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGAGAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTATATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATCCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

90.367

100

0.904