Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KEM15_RS10225 Genome accession   NZ_CP073632
Coordinates   1969865..1970623 (+) Length   252 a.a.
NCBI ID   WP_274504412.1    Uniprot ID   -
Organism   Streptococcus parasuis strain NN1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1964865..1975623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KEM15_RS10210 (KEM15_10045) - 1967201..1967863 (-) 663 WP_274504411.1 YoaK family protein -
  KEM15_RS10215 (KEM15_10050) rlmH 1967891..1968370 (-) 480 WP_130554909.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KEM15_RS10220 (KEM15_10055) htrA 1968621..1969802 (+) 1182 WP_217374443.1 trypsin-like peptidase domain-containing protein Regulator
  KEM15_RS10225 (KEM15_10060) spo0J 1969865..1970623 (+) 759 WP_274504412.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28967.37 Da        Isoelectric Point: 9.1516

>NTDB_id=559545 KEM15_RS10225 WP_274504412.1 1969865..1970623(+) (spo0J) [Streptococcus parasuis strain NN1]
MEELHYLKIKDIQANPYQPRLHFDEEKLLELAQSIKENGVIQPIIVRRSPVIGFELLAGERRLRASQLAGLTEIPAVIKH
LSDDDLLYQAIIENLQRSDLNPIEEAHSYEKLIEKGLTHDEIAQIMGKSRPYITNLLRLLHLSESTRQAVETGKITQGHA
RQLVALSEKQQAEWVQKIQEKDISVRKLETILSSKKKKTIRKSNQFISEEEEKLAKLLGTKVTIQQKKNGSGQLTIHFQN
IEEFERIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=559545 KEM15_RS10225 WP_274504412.1 1969865..1970623(+) (spo0J) [Streptococcus parasuis strain NN1]
ATGGAAGAACTACACTATCTCAAAATAAAAGACATTCAGGCCAATCCCTATCAACCAAGATTGCATTTTGATGAAGAAAA
ATTATTGGAATTAGCTCAATCTATCAAAGAAAATGGCGTCATTCAACCTATTATTGTTCGCAGATCACCGGTGATTGGTT
TTGAGTTACTTGCTGGTGAAAGACGATTAAGAGCTAGTCAACTAGCGGGATTAACAGAGATTCCAGCAGTCATCAAGCAT
CTATCTGATGATGATTTGCTCTACCAAGCTATCATAGAAAACTTACAACGCTCTGACCTCAATCCTATTGAAGAGGCTCA
TTCCTACGAAAAGTTGATAGAAAAAGGCTTAACACATGATGAGATTGCTCAAATCATGGGAAAATCACGACCATATATCA
CTAATCTTCTTCGTTTACTCCATTTATCCGAATCTACGAGGCAAGCAGTAGAAACAGGAAAAATCACACAAGGGCATGCT
AGACAGCTAGTAGCACTATCAGAGAAACAACAAGCAGAATGGGTTCAAAAAATCCAAGAAAAGGATATCAGCGTACGAAA
ATTAGAAACAATACTATCCTCTAAAAAGAAAAAAACAATTAGAAAATCCAACCAATTTATTTCAGAAGAAGAAGAGAAAT
TAGCAAAACTACTTGGAACCAAAGTAACAATCCAACAAAAGAAAAATGGATCGGGACAACTGACTATTCACTTTCAAAAC
ATCGAAGAATTTGAAAGAATTATCAACAGTCTGAAATAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.118

100

0.556