Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   L2Z42_RS11605 Genome accession   NZ_CP091335
Coordinates   2397458..2398093 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain ATCC17978-VUB     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2392458..2403093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z42_RS11585 (L2Z42_11585) - 2392535..2393350 (+) 816 WP_000011166.1 DsbC family protein -
  L2Z42_RS11590 (L2Z42_11590) - 2393595..2394896 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  L2Z42_RS11595 (L2Z42_11595) thrC 2394952..2396091 (+) 1140 WP_000063593.1 threonine synthase -
  L2Z42_RS11600 (L2Z42_11600) pbpG 2396199..2397245 (-) 1047 WP_005140205.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  L2Z42_RS11605 (L2Z42_11605) letA 2397458..2398093 (+) 636 WP_000633799.1 response regulator Regulator
  L2Z42_RS11610 (L2Z42_11610) pilS 2398104..2399672 (+) 1569 WP_001160327.1 ATP-binding protein Regulator
  L2Z42_RS11615 (L2Z42_11615) - 2399697..2401118 (+) 1422 WP_049594865.1 sigma-54 dependent transcriptional regulator -
  L2Z42_RS11620 (L2Z42_11620) - 2401122..2402306 (-) 1185 WP_000939111.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=558640 L2Z42_RS11605 WP_000633799.1 2397458..2398093(+) (letA) [Acinetobacter baumannii strain ATCC17978-VUB]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=558640 L2Z42_RS11605 WP_000633799.1 2397458..2398093(+) (letA) [Acinetobacter baumannii strain ATCC17978-VUB]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACAAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55