Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   KCX77_RS01935 Genome accession   NZ_CP073265
Coordinates   380075..380473 (-) Length   132 a.a.
NCBI ID   WP_010787604.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain CNY01     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 375075..385473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCX77_RS01905 (KCX77_01905) - 376065..376520 (+) 456 WP_010787599.1 RDD family protein -
  KCX77_RS01910 (KCX77_01910) - 376605..376934 (+) 330 WP_010787600.1 YckD family protein -
  KCX77_RS01915 (KCX77_01915) - 377038..377463 (+) 426 WP_010787601.1 MarR family transcriptional regulator -
  KCX77_RS01920 (KCX77_01920) - 377451..377792 (+) 342 WP_106047525.1 DUF3147 family protein -
  KCX77_RS01925 (KCX77_01925) - 377813..378532 (+) 720 WP_003328073.1 AAA family ATPase -
  KCX77_RS01930 (KCX77_01930) - 378602..380038 (+) 1437 WP_212064163.1 family 1 glycosylhydrolase -
  KCX77_RS01935 (KCX77_01935) nin/comJ 380075..380473 (-) 399 WP_010787604.1 competence protein ComJ Regulator
  KCX77_RS01940 (KCX77_01940) nucA/comI 380492..380929 (-) 438 WP_010787605.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  KCX77_RS01945 (KCX77_01945) - 381151..382854 (-) 1704 WP_010787606.1 methyl-accepting chemotaxis protein -
  KCX77_RS01950 (KCX77_01950) hxlB 382983..383540 (-) 558 WP_010787607.1 6-phospho-3-hexuloisomerase -
  KCX77_RS01955 (KCX77_01955) hxlA 383547..384179 (-) 633 WP_088116480.1 3-hexulose-6-phosphate synthase -
  KCX77_RS01960 (KCX77_01960) - 384397..384762 (+) 366 WP_106047522.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14839.70 Da        Isoelectric Point: 4.7105

>NTDB_id=558601 KCX77_RS01935 WP_010787604.1 380075..380473(-) (nin/comJ) [Bacillus atrophaeus strain CNY01]
MTNSWKPQELIISYHQFTIFQKNSKPPIIDWTDEAIEKGYAEADGAVSFEAQRNSKVFIILRLNSSDIVESYEKKATVPF
HVSGDGINIESVMSKRLSFDLPKGQYVFTCYTVPAEASDLHADTYIIDAAAQ

Nucleotide


Download         Length: 399 bp        

>NTDB_id=558601 KCX77_RS01935 WP_010787604.1 380075..380473(-) (nin/comJ) [Bacillus atrophaeus strain CNY01]
TTGACAAATTCATGGAAACCGCAAGAGCTCATTATCTCATATCATCAATTTACCATTTTTCAAAAGAATTCAAAGCCGCC
TATAATAGATTGGACGGATGAAGCGATTGAAAAAGGATATGCAGAGGCCGACGGAGCCGTTTCATTCGAAGCGCAGAGAA
ACTCCAAAGTGTTTATTATCTTGCGTCTCAACAGCTCAGACATAGTTGAATCCTATGAAAAAAAAGCAACTGTTCCTTTT
CATGTCTCAGGGGACGGGATAAATATAGAAAGTGTCATGTCAAAAAGGCTGTCATTTGATTTGCCGAAAGGTCAATACGT
CTTCACTTGCTATACCGTTCCCGCTGAAGCGTCAGACCTGCATGCAGATACATATATTATTGACGCTGCTGCACAATAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.099

99.242

0.765