Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   L2Z44_RS15655 Genome accession   NZ_CP091333
Coordinates   3258230..3258865 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain DSM30011-VUB     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3253230..3263865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z44_RS15635 (L2Z44_15635) - 3253306..3254121 (+) 816 WP_075400779.1 DsbC family protein -
  L2Z44_RS15640 (L2Z44_15640) - 3254366..3255667 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  L2Z44_RS15645 (L2Z44_15645) thrC 3255723..3256862 (+) 1140 WP_000063593.1 threonine synthase -
  L2Z44_RS15650 (L2Z44_15650) pbpG 3256970..3258016 (-) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  L2Z44_RS15655 (L2Z44_15655) letA 3258230..3258865 (+) 636 WP_000633799.1 response regulator Regulator
  L2Z44_RS15660 (L2Z44_15660) pilS 3258876..3260444 (+) 1569 WP_001160328.1 ATP-binding protein Regulator
  L2Z44_RS15665 (L2Z44_15665) - 3260469..3261890 (+) 1422 WP_075400780.1 sigma-54 dependent transcriptional regulator -
  L2Z44_RS15670 (L2Z44_15670) - 3261894..3263078 (-) 1185 WP_075400781.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=558499 L2Z44_RS15655 WP_000633799.1 3258230..3258865(+) (letA) [Acinetobacter baumannii strain DSM30011-VUB]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=558499 L2Z44_RS15655 WP_000633799.1 3258230..3258865(+) (letA) [Acinetobacter baumannii strain DSM30011-VUB]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55