Detailed information NTG0558442

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: KCV10_RS06110
• Genome accession: NZ_CP073243
• Coordinates: 1327807..1329228 (+)
• Length: 473 a.a.
• NCBI ID: WP_212512008.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain S63-3
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1322807..1334228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCV10_RS06090	thrC	1323063..1324202 (+)	1140	WP_019457006.1	threonine synthase	-
KCV10_RS06095	pbpG	1324311..1325357 (-)	1047	WP_134263468.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
KCV10_RS06100	-	1325569..1326204 (+)	636	WP_019457005.1	response regulator	-
KCV10_RS06105	pilS	1326215..1327783 (+)	1569	WP_212512007.1	sensor histidine kinase	Regulator
KCV10_RS06110	pilR	1327807..1329228 (+)	1422	WP_212512008.1	sigma-54-dependent transcriptional regulator	Regulator
KCV10_RS06115	-	1329232..1330416 (-)	1185	WP_212512009.1	S41 family peptidase	-
KCV10_RS06120	gpmI	1330432..1331979 (-)	1548	WP_004699264.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
KCV10_RS06125	lptG	1332105..1333175 (-)	1071	WP_004699266.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53181.37 Da
• Isoelectric Point: 6.5064

>NTDB_id=558442 KCV10_RS06110 WP_212512008.1 1327807..1329228(+) (pilR) [Acinetobacter seifertii strain S63-3]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFAQFHYDACLTDLNLPDGSGLDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVNKPINQVHLDQLLQKALNRQQTDQDFAETALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPLGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLMLPPLRERGEDVLL
LANHFIQKICMEWETPPKQLSDAAETYLLQQHFPGNVRELRNMIERAITLSDDAQIDVPHLHPAPLRANISSSVPLVSQT
IQNNVTTPQVVKKLPTEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=558442 KCV10_RS06110 WP_212512008.1 1327807..1329228(+) (pilR) [Acinetobacter seifertii strain S63-3]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCGCTCAGTTTCATTACGACGCATGCT
TAACCGATTTAAATCTACCTGATGGTAGCGGGTTAGACTTAGTCAAACATGTCTCTCAAAACTACCCCAACACCCCAATT
GCAGTTTTAACTGCATACGGCAATATGGATATTGCAATTGCTGCATTAAAAGCAGGTGCTTTTGATTTTGTGAATAAACC
TATTAACCAAGTCCATTTAGATCAGTTATTGCAAAAGGCGCTCAATCGGCAACAAACAGATCAAGACTTTGCAGAAACAG
CGCTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATTCAACAATTACGCATTGCAATTAAAAAAATTGCTCGTTCT
CAAGCACCTGTATTTGTTACGGGTGAGTCAGGAACAGGTAAAGAAGTAGTTGCCAATCTAGTTCATCGGTTGAGTAACCG
TAGTGAAGGTCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACTGAACTCATGGAAAGTGAGCTGTTTGGACATAAAA
AAGGCAGTTTTACTGGGGCAACTCAAGATAAACAGGGTCTGATTTTATCGGCTCACGGCGGTAGTTTATTTTTAGATGAA
ATTGCCGAATTACCACTCAGTATGCAAGTCAAACTACTGCGTGCAGTACAGGAAAAAAAGATCCGTCCTCTCGGTTCCGA
TCAGGAAATTGATGTTGATTTCCGTGTCATTAGTGCGAGTCATCAAGACTTGGATTTATTGGTTAGACAAGGCAAATTCC
GTCAGGATTTATTCTTCCGTATCCATGTTATGGACTTGATGTTACCACCGCTACGAGAACGTGGCGAAGATGTCCTTTTA
CTTGCAAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACACCACCCAAACAATTAAGCGACGCAGCCGAGACTTA
TCTCTTACAGCAACACTTTCCTGGCAATGTTCGCGAATTAAGAAACATGATTGAGCGAGCAATCACCCTAAGTGACGATG
CTCAAATTGATGTACCACACTTACATCCAGCGCCATTAAGAGCAAATATCTCTAGCTCAGTACCATTGGTATCTCAGACT
ATACAAAATAACGTGACAACGCCTCAAGTTGTAAAAAAATTGCCAACTGAAGGATTGGAGCGTTATTTAGAGAACATTGA
AAAAGATATTCTGCTCAATGCACTCAATATGACCCATTGGAACAGAACTTTAGCAGCAAAAAAACTAGGAATGACGTTTC
GTTCTTTACGTTATCGTTTGAAAAAATTTGGCTTAGACACCGAGACTGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	93.235	100	0.932
pilR	Pseudomonas aeruginosa PAK	50.545	97.04	0.49