Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KCG51_RS10730 Genome accession   NZ_CP073119
Coordinates   2273293..2273988 (-) Length   231 a.a.
NCBI ID   WP_003683989.1    Uniprot ID   -
Organism   Neisseria subflava strain HP0069     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2268293..2278988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG51_RS10715 (KCG51_10740) ccsA 2270386..2271197 (-) 812 Protein_2065 cytochrome c biogenesis protein CcsA -
  KCG51_RS10720 (KCG51_10745) ffh 2271379..2272749 (+) 1371 WP_003684000.1 signal recognition particle protein -
  KCG51_RS10725 (KCG51_10750) - 2272852..2273151 (-) 300 WP_250581010.1 hypothetical protein -
  KCG51_RS10730 (KCG51_10755) dsbA2 2273293..2273988 (-) 696 WP_003683989.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KCG51_RS10735 (KCG51_10760) - 2274158..2276269 (-) 2112 WP_250581012.1 TonB-dependent receptor -
  KCG51_RS10740 (KCG51_10765) - 2276429..2276960 (-) 532 Protein_2070 alpha/beta hydrolase -
  KCG51_RS10745 (KCG51_10770) - 2276971..2277315 (-) 345 WP_070608462.1 hypothetical protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25298.79 Da        Isoelectric Point: 5.3625

>NTDB_id=558183 KCG51_RS10730 WP_003683989.1 2273293..2273988(-) (dsbA2) [Neisseria subflava strain HP0069]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=558183 KCG51_RS10730 WP_003683989.1 2273293..2273988(-) (dsbA2) [Neisseria subflava strain HP0069]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCGCATCCGCTCCGGCAGCGCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAACAGGCCGGCAAAGTCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATTTGGAGCCGGTTTTGAGCGAACACACCAAAACGTTTAAAGACGATACCTATCTGCGTCGCGAGCATGTGATTTGGGG
CGACGAAATGAAACCTTTGGCACGTTTGGCCGCCGCAGTGGAAATGGCCGGCGAATCAGATAAAGCCAACAGTCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATTTGGCCGATACCGATACCCTGAAAAAATGGTTGTCTGAGCAAACTGCATTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGTACACCAACCGTTATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAGTTAGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.537

100

0.965
  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719