Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KCG55_RS03275 Genome accession   NZ_CP073117
Coordinates   669050..669745 (-) Length   231 a.a.
NCBI ID   WP_254323386.1    Uniprot ID   -
Organism   Neisseria subflava strain HP0015     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 664050..674745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG55_RS03265 (KCG55_03270) ccsA 666518..667330 (-) 813 WP_254323385.1 cytochrome c biogenesis protein CcsA -
  KCG55_RS03270 (KCG55_03275) ffh 667513..668883 (+) 1371 WP_003684000.1 signal recognition particle protein -
  KCG55_RS03275 (KCG55_03280) dsbA2 669050..669745 (-) 696 WP_254323386.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KCG55_RS03280 (KCG55_03285) - 669916..671874 (-) 1959 Protein_624 TonB-dependent receptor -
  KCG55_RS03285 (KCG55_03290) - 672054..672212 (-) 159 WP_254323387.1 hypothetical protein -
  KCG55_RS03290 (KCG55_03295) - 672372..672905 (-) 534 WP_254323388.1 alpha/beta hydrolase -
  KCG55_RS03295 (KCG55_03300) - 672916..673260 (-) 345 WP_063076184.1 hypothetical protein -
  KCG55_RS03300 (KCG55_03305) - 673247..674026 (-) 780 WP_003684015.1 exodeoxyribonuclease III -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25288.75 Da        Isoelectric Point: 5.3625

>NTDB_id=558111 KCG55_RS03275 WP_254323386.1 669050..669745(-) (dsbA2) [Neisseria subflava strain HP0015]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASAPAAPAPLTEGVNYTVLSTSIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=558111 KCG55_RS03275 WP_254323386.1 669050..669745(-) (dsbA2) [Neisseria subflava strain HP0015]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAGCGCATCCGCTCCGGCAGCGCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCTACGTCTATTCCGCAACAACAGGCCGGCAAAGTCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATTTGGAGCCGGTTTTGAGCGAACACACCAAAACGTTCAAAGACGATACCTACCTGCGTCGCGAGCATGTGATTTGGGG
CGACGAAATGAAACCTTTGGCACGTTTGGCCGCCGCAGTGGAAATGGCCGGCGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGTTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCACGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTTATCGTCGGCGGCAAATATCAAGTTGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGATCAGTTGGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

95.775

92.208

0.883
  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714