Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KCG56_RS08490 Genome accession   NZ_CP073116
Coordinates   1767713..1768408 (-) Length   231 a.a.
NCBI ID   WP_254321154.1    Uniprot ID   A0A9X9N2S4
Organism   Neisseria subflava strain TT0073     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1762713..1773408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG56_RS08475 (KCG56_08525) ccsA 1764804..1765616 (-) 813 WP_003684009.1 cytochrome c biogenesis protein CcsA -
  KCG56_RS08480 (KCG56_08530) ffh 1765799..1767169 (+) 1371 WP_003684000.1 signal recognition particle protein -
  KCG56_RS08485 (KCG56_08535) - 1767272..1767571 (-) 300 WP_083314038.1 hypothetical protein -
  KCG56_RS08490 (KCG56_08540) dsbA2 1767713..1768408 (-) 696 WP_254321154.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KCG56_RS08495 (KCG56_08545) - 1768582..1770693 (-) 2112 WP_254321155.1 TonB-dependent receptor -
  KCG56_RS08500 (KCG56_08550) - 1770852..1771385 (-) 534 WP_254321156.1 alpha/beta hydrolase -
  KCG56_RS08505 (KCG56_08555) - 1771396..1771740 (-) 345 WP_049330844.1 hypothetical protein -
  KCG56_RS08510 (KCG56_08560) - 1771727..1772506 (-) 780 WP_003684015.1 exodeoxyribonuclease III -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25284.76 Da        Isoelectric Point: 5.3625

>NTDB_id=558086 KCG56_RS08490 WP_254321154.1 1767713..1768408(-) (dsbA2) [Neisseria subflava strain TT0073]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=558086 KCG56_RS08490 WP_254321154.1 1767713..1768408(-) (dsbA2) [Neisseria subflava strain TT0073]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGCCCAAAGCAGCGCATCCGCTCCGGCAGCACCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAACAGGCCGGCAAAGTTGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATTTGGAGCCGGTTTTGAGCGAACACACCAAAACGTTTAAAGACGATACCTACCTGCGTCGCGAGCATGTCGTGTGGGG
TGACGAAATGAAACCTTTGGCACGTTTGGCCGCCGCAGTGGAAATGGCCGGCGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAACTTGGCCGATACCGATACACTGAAAAAATGGTTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCACGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGTACACCAACCGTTATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAGTTAGTGGACAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.97

100

0.97
  dsbA1 Neisseria meningitidis MC58

71.674

100

0.723