Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KCG54_RS10190 Genome accession   NZ_CP073115
Coordinates   2121110..2121805 (-) Length   231 a.a.
NCBI ID   WP_003749428.1    Uniprot ID   A0A9X9QXY5
Organism   Neisseria subflava strain TT0077     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2116110..2126805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG54_RS10180 (KCG54_10205) ccsA 2118580..2119392 (-) 813 WP_254324106.1 cytochrome c biogenesis protein CcsA -
  KCG54_RS10185 (KCG54_10210) ffh 2119574..2120944 (+) 1371 WP_070645238.1 signal recognition particle protein -
  KCG54_RS10190 (KCG54_10215) dsbA2 2121110..2121805 (-) 696 WP_003749428.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KCG54_RS10195 (KCG54_10220) - 2121976..2124084 (-) 2109 WP_254324107.1 TonB-dependent receptor -
  KCG54_RS10200 (KCG54_10225) - 2124250..2124783 (-) 534 WP_254324108.1 alpha/beta hydrolase -
  KCG54_RS10205 (KCG54_10230) - 2124794..2125138 (-) 345 WP_070608462.1 hypothetical protein -
  KCG54_RS10210 (KCG54_10235) - 2125125..2125904 (-) 780 WP_254324109.1 exodeoxyribonuclease III -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25372.89 Da        Isoelectric Point: 5.3625

>NTDB_id=558053 KCG54_RS10190 WP_003749428.1 2121110..2121805(-) (dsbA2) [Neisseria subflava strain TT0077]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSNTSAPAAPAALTEGVNYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=558053 KCG54_RS10190 WP_003749428.1 2121110..2121805(-) (dsbA2) [Neisseria subflava strain TT0077]
ATGAAACTGAAAACCTTAGCCTTGACCTCATTAACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCGGAAACCAGCGT
TCCAGCAGACAGCGCCCAAAGCAACACATCCGCTCCGGCAGCCCCTGCCGCATTGACCGAAGGTGTCAATTACACCGTAT
TGTCCAATCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCTGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGACGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAACTTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACGCCGACCGTTATTGTCGGTGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGATCAGTTGGTGGACAAAGTACGCGAAGAGCAGAAGAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.403

100

0.974
  dsbA1 Neisseria meningitidis MC58

71.674

100

0.723