Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   L1O91_RS05950 Genome accession   NZ_CP091066
Coordinates   1253441..1254064 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain UMCG579     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1248441..1259064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1O91_RS05925 (L1O91_05925) rpmG 1250018..1250167 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  L1O91_RS05930 (L1O91_05930) rpsN 1250620..1250889 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  L1O91_RS05935 (L1O91_05935) guaC 1251046..1252023 (+) 978 WP_054190611.1 GMP reductase -
  L1O91_RS05945 (L1O91_05945) - 1252045..1253061 (+) 1017 WP_171973432.1 CAP domain-containing protein -
  L1O91_RS05950 (L1O91_05950) dinR/lexA 1253441..1254064 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  L1O91_RS05955 (L1O91_05955) sosA 1254207..1254440 (+) 234 WP_077446722.1 DNA damage-induced cell division inhibitor SosA -
  L1O91_RS05960 (L1O91_05960) - 1254624..1255940 (+) 1317 WP_257553082.1 ISL3 family transposase -
  L1O91_RS05965 (L1O91_05965) - 1256074..1256313 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  L1O91_RS05970 (L1O91_05970) recP/tkt 1256434..1258422 (+) 1989 WP_054190754.1 transketolase Machinery gene
  L1O91_RS05975 (L1O91_05975) - 1258700..1258942 (+) 243 WP_000246909.1 YneF family protein -
  L1O91_RS05980 (L1O91_05980) - 1258929..1259027 (+) 99 WP_054190753.1 hypothetical protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=558041 L1O91_RS05950 WP_001208755.1 1253441..1254064(-) (dinR/lexA) [Staphylococcus aureus strain UMCG579]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=558041 L1O91_RS05950 WP_001208755.1 1253441..1254064(-) (dinR/lexA) [Staphylococcus aureus strain UMCG579]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGTGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACATTTAACATCGACACACAATAGCGATATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACC
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657