Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   KCG52_RS06910 Genome accession   NZ_CP073114
Coordinates   1442648..1443343 (+) Length   231 a.a.
NCBI ID   WP_003749428.1    Uniprot ID   A0A9X9QXY5
Organism   Neisseria subflava strain HP0048     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1437648..1448343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG52_RS06890 (KCG52_06870) - 1438546..1439325 (+) 780 WP_049322320.1 exodeoxyribonuclease III -
  KCG52_RS06895 (KCG52_06875) - 1439312..1439656 (+) 345 WP_049330844.1 hypothetical protein -
  KCG52_RS06900 (KCG52_06880) - 1439667..1440200 (+) 534 WP_254343487.1 alpha/beta hydrolase -
  KCG52_RS06905 (KCG52_06885) - 1440367..1442478 (+) 2112 WP_254343489.1 TonB-dependent receptor -
  KCG52_RS06910 (KCG52_06890) dsbA2 1442648..1443343 (+) 696 WP_003749428.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  KCG52_RS06915 (KCG52_06895) ffh 1443512..1444882 (-) 1371 WP_004520277.1 signal recognition particle protein -
  KCG52_RS06920 (KCG52_06900) ccsA 1445066..1445878 (+) 813 WP_003749434.1 cytochrome c biogenesis protein CcsA -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25372.89 Da        Isoelectric Point: 5.3625

>NTDB_id=558002 KCG52_RS06910 WP_003749428.1 1442648..1443343(+) (dsbA2) [Neisseria subflava strain HP0048]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSNTSAPAAPAALTEGVNYTVLSNPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=558002 KCG52_RS06910 WP_003749428.1 1442648..1443343(+) (dsbA2) [Neisseria subflava strain HP0048]
ATGAAACTGAAAACCTTAGCCTTGACTTCATTAACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCGGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAACACATCCGCTCCGGCAGCCCCTGCCGCATTGACAGAAGGTGTCAATTACACCGTCT
TGTCCAACCCGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTCGGCTACTTCTGCCCGCATTGTGCC
CATTTGGAGCCGGTTTTGAGCGAACACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTTTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCTGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAACTTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACCGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTGATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGATTGGCAGTCCGGCATGA
CCACGATTGACCAACTGGTGGACAAAGTACGCGAAGAGCAGAAAAAACCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.403

100

0.974
  dsbA1 Neisseria meningitidis MC58

71.674

100

0.723