Detailed information NTG0557954

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: KCX70_RS15175
• Genome accession: NZ_CP073105
• Coordinates: 3290646..3292871 (-)
• Length: 741 a.a.
• NCBI ID: WP_212618045.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain F2
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3285646..3297871

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KCX70_RS15140 (KCX70_15140)	murB	3286037..3287056 (-)	1020	WP_212618041.1	UDP-N-acetylmuramate dehydrogenase	-
KCX70_RS15145 (KCX70_15145)	-	3287053..3287517 (-)	465	WP_212618042.1	low molecular weight protein-tyrosine-phosphatase	-
KCX70_RS15150 (KCX70_15150)	kdsB	3287520..3288284 (-)	765	WP_212618043.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KCX70_RS15155 (KCX70_15155)	-	3288281..3288466 (-)	186	WP_019342470.1	Trm112 family protein	-
KCX70_RS15160 (KCX70_15160)	lpxK	3288513..3289517 (-)	1005	WP_212618044.1	tetraacyldisaccharide 4'-kinase	-
KCX70_RS15165 (KCX70_15165)	-	3289517..3289945 (-)	429	WP_021206498.1	biopolymer transporter ExbD	-
KCX70_RS15170 (KCX70_15170)	-	3289942..3290574 (-)	633	WP_021206499.1	MotA/TolQ/ExbB proton channel family protein	-
KCX70_RS15175 (KCX70_15175)	comA	3290646..3292871 (-)	2226	WP_212618045.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
KCX70_RS15180 (KCX70_15180)	-	3293056..3293571 (+)	516	WP_021206501.1	DUF2062 domain-containing protein	-
KCX70_RS15185 (KCX70_15185)	-	3293579..3294826 (-)	1248	WP_212618046.1	lipoprotein-releasing ABC transporter permease subunit	-
KCX70_RS15190 (KCX70_15190)	lolD	3294826..3295524 (-)	699	WP_212620354.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
KCX70_RS15195 (KCX70_15195)	-	3295532..3296779 (-)	1248	WP_212618047.1	lipoprotein-releasing ABC transporter permease subunit	-
KCX70_RS15200 (KCX70_15200)	-	3296880..3297452 (+)	573	WP_031310695.1	PilZ domain-containing protein	-
KCX70_RS15205 (KCX70_15205)	-	3297454..3297759 (+)	306	WP_021206506.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80069.99 Da
• Isoelectric Point: 9.6033

>NTDB_id=557954 KCX70_RS15175 WP_212618045.1 3290646..3292871(-) (comA) [Stutzerimonas stutzeri strain F2]
MRAAMLALAAGLILLRFLPQLPPPSALPLVILAGLLLLPSRWRVIGCFLCGLGWACLSAHWALSDRLPTALDGRTFWLEG
RVTGLPDVRGGVVRFELTDISSRHEGLPSRMRLAWYGGPAMQAGERWRLAAKLKRPRGLVNPQPFDYEAWLLARRIGASG
TVKAGERTGLAVGGQGARDQLRQRLLAVDAQGRSGAIAALVVGDDSGLSTADWRILQDTGTVHLMVISGQHVGMLAGLLY
GLVALLARWGFWPQRIAWLPCACGAALAGALVYGWLAGFDVPVQRALIMVALVLLWRLRFRHLGVCLPLLIALDGVLLFD
PLVVLRSGFWLSFLAVALLAYIFRGRLGRWGGWQTLGRAQWGMAIGLLPFLLILGLPVSLSGPVANLFAVPLVSVLIVPL
SLMGTALLWLPGVGEALLWLAGGLLVYLFDALRWLAGWQAAWLPASLPLWAWSLVTLGTLLILAPAGLPLRALGLVLLAP
LLFPPINKPAHGQADVWILDVGQGLAVLVRTHEHALLYDAGPRYGDFDIGERVVSPSLRTLGAADLDLMVLSHADSDHAG
GAAAILRQMPVARVLSGEPERLPASLGAEACPSGLHWEWDHVGFTLWRWSQARNGNQSSCVLMVEANGERLLLTGDIDVP
AEQALLASGMPLKVRWLLLPHHGSHSSSSEAFIEAAGAEGALVSRSLHNAFGHPHPDVVRRIEASGAQLYDTAEQGALQI
RLGRFESPRGLRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=557954 KCX70_RS15175 WP_212618045.1 3290646..3292871(-) (comA) [Stutzerimonas stutzeri strain F2]
ATGCGTGCAGCGATGCTGGCGCTGGCAGCGGGCCTCATACTGCTGCGTTTTCTACCGCAACTTCCACCCCCGTCTGCGCT
CCCGCTAGTCATCCTGGCCGGGTTGCTGTTGCTGCCGTCCCGCTGGCGCGTGATCGGTTGTTTCCTGTGCGGGCTTGGTT
GGGCCTGTCTGAGCGCCCATTGGGCATTGAGCGATCGCCTGCCAACGGCGCTCGACGGCCGCACGTTCTGGCTTGAAGGT
CGGGTGACCGGTCTGCCGGATGTTCGCGGCGGGGTCGTGCGCTTCGAGCTGACCGATATTTCGTCGCGACATGAGGGCCT
GCCTTCACGGATGCGCCTGGCGTGGTACGGCGGGCCGGCCATGCAGGCGGGAGAGCGCTGGCGTCTCGCGGCCAAGCTGA
AGAGGCCACGAGGGTTGGTCAACCCGCAGCCATTCGACTACGAAGCCTGGCTCCTGGCGCGCCGAATCGGTGCCAGCGGG
ACCGTCAAGGCGGGCGAGCGCACCGGGTTGGCGGTGGGCGGGCAGGGGGCGCGCGATCAGCTGCGCCAACGCCTGTTGGC
CGTCGATGCCCAGGGCCGTTCAGGCGCGATCGCCGCGCTGGTGGTCGGCGACGACAGTGGCCTGTCGACGGCGGACTGGC
GCATCCTTCAAGACACCGGAACCGTCCACCTGATGGTGATCTCGGGGCAGCATGTGGGGATGCTGGCGGGCTTGCTCTAC
GGCCTGGTTGCGCTGTTGGCTCGGTGGGGCTTCTGGCCACAACGCATCGCCTGGCTGCCCTGTGCCTGTGGCGCGGCGTT
GGCTGGTGCGCTCGTATACGGCTGGCTGGCAGGCTTCGACGTTCCGGTTCAGCGAGCGCTGATCATGGTCGCGCTGGTAC
TGCTATGGCGCTTGCGATTCAGGCATCTTGGCGTTTGCTTGCCGTTGCTGATTGCGCTGGATGGCGTGTTGCTGTTCGAT
CCGCTGGTCGTTCTGCGATCGGGATTCTGGCTGTCCTTTCTGGCGGTGGCGCTGCTTGCCTATATCTTCCGCGGGCGGCT
GGGCCGTTGGGGTGGTTGGCAGACGTTGGGGCGCGCGCAGTGGGGCATGGCGATTGGGCTATTGCCGTTCCTGCTGATTC
TGGGCTTGCCGGTGAGCTTGAGCGGCCCGGTCGCCAATCTGTTCGCGGTGCCTCTGGTCAGTGTGCTGATCGTGCCGCTG
TCGTTGATGGGCACCGCCTTGTTGTGGCTGCCAGGTGTCGGCGAGGCGCTGCTCTGGCTGGCGGGCGGACTGCTGGTTTA
TCTATTCGATGCGCTGCGTTGGCTCGCCGGCTGGCAAGCGGCCTGGCTACCGGCTTCCTTGCCGCTGTGGGCCTGGTCGC
TGGTCACGCTCGGAACGCTGCTGATCCTGGCTCCAGCCGGCCTGCCCTTGCGGGCGCTGGGGTTGGTACTGCTCGCACCG
CTGTTGTTTCCCCCGATCAACAAGCCGGCCCACGGACAGGCAGACGTCTGGATCCTCGATGTCGGGCAGGGACTCGCGGT
GCTGGTTCGCACGCATGAGCATGCTTTGCTGTACGACGCCGGGCCGCGCTACGGCGACTTCGATATCGGTGAGCGAGTGG
TTTCGCCTTCGCTGCGCACGCTGGGCGCTGCGGATCTCGATCTGATGGTGCTCAGTCATGCCGATAGCGATCATGCGGGC
GGCGCTGCAGCGATCCTGCGACAAATGCCGGTCGCACGGGTGCTCAGTGGCGAACCGGAGCGACTGCCCGCGTCGCTGGG
CGCCGAGGCCTGTCCGTCAGGGCTGCACTGGGAATGGGACCATGTCGGCTTCACGCTCTGGCGCTGGTCGCAGGCTCGCA
ATGGAAACCAGTCGTCCTGCGTGCTGATGGTCGAGGCCAACGGCGAACGCCTGCTGCTAACCGGCGACATCGACGTGCCT
GCCGAGCAGGCGCTGCTGGCAAGCGGTATGCCGCTCAAGGTGCGCTGGTTGCTGCTGCCGCATCATGGCAGTCACAGTTC
CTCCTCCGAAGCCTTCATCGAGGCTGCAGGTGCGGAGGGGGCGCTCGTCTCGCGCAGTCTGCACAATGCCTTCGGACACC
CACACCCGGACGTCGTGCGGCGGATCGAGGCATCCGGCGCGCAGCTTTACGATACGGCCGAGCAGGGTGCGCTGCAGATC
CGTCTCGGACGTTTCGAGTCGCCGCGCGGATTGCGCGCCGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-463)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	71.751	95.547	0.686
comA	Ralstonia pseudosolanacearum GMI1000	37.29	100	0.39