Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   INT76_RS04980 Genome accession   NZ_CP073084
Coordinates   987474..988208 (-) Length   244 a.a.
NCBI ID   WP_212572805.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 982474..993208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS04945 (INT76_04945) - 982478..982759 (-) 282 WP_249116196.1 YlxQ-related RNA-binding protein -
  INT76_RS04950 (INT76_04950) - 982773..983069 (-) 297 WP_212572794.1 YlxR family protein -
  INT76_RS04955 (INT76_04955) nusA 983088..984233 (-) 1146 WP_212572796.1 transcription termination factor NusA -
  INT76_RS04960 (INT76_04960) rimP 984269..984739 (-) 471 WP_212572798.1 ribosome maturation factor RimP -
  INT76_RS04965 (INT76_04965) trmB 984952..985590 (-) 639 WP_212572800.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  INT76_RS04970 (INT76_04970) - 985587..986381 (-) 795 WP_212572802.1 phosphotransferase family protein -
  INT76_RS04975 (INT76_04975) pptB 986431..987477 (-) 1047 WP_212572803.1 ABC transporter permease Regulator
  INT76_RS04980 (INT76_04980) pptA 987474..988208 (-) 735 WP_212572805.1 ABC transporter ATP-binding protein Regulator
  INT76_RS04985 (INT76_04985) - 988271..988684 (+) 414 WP_212572807.1 HIT family protein -
  INT76_RS04990 (INT76_04990) - 988686..988991 (+) 306 WP_212572809.1 chemotaxis protein -
  INT76_RS04995 (INT76_04995) - 989005..990147 (-) 1143 WP_212572811.1 LCP family protein -
  INT76_RS05000 (INT76_05000) - 990144..990671 (-) 528 WP_212572812.1 GNAT family N-acetyltransferase -
  INT76_RS05005 (INT76_05005) tsaE 990664..991104 (-) 441 WP_212572820.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  INT76_RS05010 (INT76_05010) - 991188..992648 (-) 1461 WP_212572822.1 NCS2 family permease -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27129.46 Da        Isoelectric Point: 4.6902

>NTDB_id=557839 INT76_RS04980 WP_212572805.1 987474..988208(-) (pptA) [Streptococcus oriscaviae strain HKU75]
MLEIKKLTGGYANIPVLKGVSFEVADGELVGLIGLNGAGKSTTIKEIIGLLTPYQGEISIDGKTLTQDREGYRRKIGFIP
ETPSLYEELTLKEHLEVVAMAYELDWERAFERAERLLGLFRLKEKLDWYPVHFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAIADLIALLEEEKARGTSILMSTHVLDSAEKMCDRFVILHQGQVRAEGDLASLQQAFGQEGASLNDIYLALTKE
GERA

Nucleotide


Download         Length: 735 bp        

>NTDB_id=557839 INT76_RS04980 WP_212572805.1 987474..988208(-) (pptA) [Streptococcus oriscaviae strain HKU75]
ATGCTAGAAATAAAAAAACTGACAGGGGGCTATGCGAATATCCCTGTCCTAAAAGGTGTTTCTTTTGAGGTGGCTGACGG
AGAATTGGTCGGTCTGATCGGTCTGAATGGTGCAGGAAAATCAACGACTATCAAGGAAATTATTGGTCTTTTGACCCCCT
ATCAGGGAGAAATTAGCATTGACGGGAAGACCTTGACTCAGGATAGGGAGGGATACCGACGAAAGATCGGTTTTATCCCT
GAAACTCCTAGTTTGTATGAAGAATTGACTCTCAAGGAGCATTTGGAAGTGGTGGCTATGGCCTATGAGCTGGACTGGGA
GCGGGCCTTTGAGCGTGCAGAACGTCTTCTTGGTCTGTTTCGACTCAAGGAAAAATTAGACTGGTACCCGGTTCATTTTT
CTAAGGGAATGAAGCAGAAGGTCATGATTATCTGCGCTTTTATGGTAGAGCCTAGTCTTTTGATTGTGGATGAGCCTTTT
TTGGGGCTGGATCCCGTAGCGATTGCAGATTTGATTGCTCTTTTGGAGGAAGAAAAGGCGCGTGGAACCTCTATTCTTAT
GTCCACCCATGTGCTTGATTCGGCTGAAAAAATGTGTGATCGCTTTGTCATTTTGCATCAGGGACAGGTGCGGGCAGAGG
GAGATTTGGCTAGTTTGCAGCAGGCCTTCGGTCAAGAAGGGGCTAGTCTTAATGACATTTATTTAGCCTTGACCAAAGAA
GGAGAACGGGCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

74.895

97.951

0.734