Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   INT76_RS02790 Genome accession   NZ_CP073084
Coordinates   569915..571717 (-) Length   600 a.a.
NCBI ID   WP_212571957.1    Uniprot ID   -
Organism   Streptococcus oriscaviae strain HKU75     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 564915..576717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  INT76_RS02760 (INT76_02760) - 565865..566335 (-) 471 WP_212571942.1 hypothetical protein -
  INT76_RS02765 (INT76_02765) - 566351..566848 (-) 498 WP_212571944.1 LURP-one-related family protein -
  INT76_RS02770 (INT76_02770) prsA 567053..568018 (-) 966 WP_212571950.1 peptidylprolyl isomerase PrsA -
  INT76_RS02775 (INT76_02775) - 568080..568799 (-) 720 WP_212571952.1 O-methyltransferase -
  INT76_RS02780 (INT76_02780) - 568885..569436 (-) 552 WP_212571954.1 hypothetical protein -
  INT76_RS02785 (INT76_02785) - 569452..569913 (-) 462 WP_212571956.1 hypothetical protein -
  INT76_RS02790 (INT76_02790) pepF 569915..571717 (-) 1803 WP_212571957.1 oligoendopeptidase F Regulator
  INT76_RS02795 (INT76_02795) coiA 571787..572728 (-) 942 WP_212571959.1 competence protein CoiA family protein Machinery gene
  INT76_RS02800 (INT76_02800) - 572798..573028 (+) 231 WP_212571961.1 DUF4190 domain-containing protein -
  INT76_RS02805 (INT76_02805) - 573159..573578 (+) 420 WP_212571963.1 GNAT family protein -
  INT76_RS02810 (INT76_02810) metG 573703..575706 (-) 2004 WP_212571965.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69176.36 Da        Isoelectric Point: 4.5193

>NTDB_id=557825 INT76_RS02790 WP_212571957.1 569915..571717(-) (pepF) [Streptococcus oriscaviae strain HKU75]
MSKQRHEIEEKYQWDLTTIFPTDEAWEAELADLQAETEKAKAFAGHLLDSAKTLLDISETQLDLMRRVEKLYVYASMKND
QDTREGLYQEFQAKAIGLYSAFQQVFAFYEPEFLKITEEQLAVFKEEEPALCQYSHQLEKLLAAKAHVLSQEVEEVLAAT
SEIFEAPSETFSILDNASLRFPEIADEDGKLVPLTHGNYISFMESKNREVRQEAYEAMYGTYQQFQHTYAKTLQSNVKVN
NLKARLRKYDSARHAALSANFIPETVYETLVSAVNKHLPLLHRYINLRKKLLGIDELKMYDMYTPLSDTDYKFSYEDALA
KAADTLTIFGDEYTAIVKEAFENRWIDVHENEGKRSGAYSGGAYDTNAFMLLNWQDTLDNLYTLIHETGHSLHSMFTRQN
QPYVYGHYSIFLAEIASTTNENLLTEKLLSEVEDDKTRFAILNHYLDGFRGTVFRQTQFAEFEQAIYTADQEGQVLTADF
LSQLYAELNQKYYGLSAEDNPEIQYEWARIPHFYYNFYVYQYSTGFAAASALSDKIVNGSPEDKENYLDYLKAGSSDYPL
EVMKKAGVDMTKEDYLNDAFKVFEARLTELEALVEKGVHL

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=557825 INT76_RS02790 WP_212571957.1 569915..571717(-) (pepF) [Streptococcus oriscaviae strain HKU75]
ATGTCTAAACAACGTCATGAAATTGAAGAAAAATACCAGTGGGATTTGACCACTATTTTCCCAACAGATGAGGCTTGGGA
AGCAGAGCTTGCTGATTTGCAGGCGGAAACGGAGAAAGCTAAGGCCTTTGCAGGGCATTTGCTTGATTCAGCTAAGACCT
TATTGGACATCAGCGAAACCCAGCTCGACTTGATGCGTCGGGTTGAGAAGCTCTATGTGTATGCTTCCATGAAAAACGAC
CAAGATACACGTGAAGGGCTGTATCAGGAGTTTCAAGCTAAGGCTATCGGGCTCTATTCTGCCTTCCAGCAGGTCTTTGC
CTTCTATGAGCCGGAATTTTTGAAGATTACCGAAGAGCAGTTAGCTGTCTTCAAGGAAGAAGAACCAGCACTTTGCCAGT
ATAGTCACCAGCTTGAAAAACTATTGGCAGCCAAAGCTCATGTCCTATCTCAGGAAGTGGAAGAAGTGCTTGCTGCAACG
AGTGAGATTTTTGAAGCGCCGTCTGAAACCTTCTCCATCTTAGACAATGCCAGCCTGCGCTTCCCAGAAATAGCAGATGA
AGATGGCAAACTAGTACCGCTCACGCATGGGAACTACATCTCCTTTATGGAATCTAAGAACCGTGAAGTTCGTCAGGAAG
CATATGAGGCAATGTATGGCACCTACCAGCAGTTCCAGCATACCTATGCCAAGACCTTGCAGTCTAATGTCAAAGTCAAT
AACCTAAAAGCTCGTTTGCGCAAGTACGATTCAGCTCGCCACGCAGCTCTTTCTGCCAACTTCATTCCAGAAACTGTTTA
CGAAACACTAGTTTCAGCAGTTAACAAGCATCTTCCGCTCTTGCACCGCTATATCAATCTGCGTAAGAAACTCTTGGGAA
TTGATGAACTCAAGATGTACGATATGTATACACCGCTGTCTGATACGGATTACAAGTTTAGCTACGAAGACGCTTTAGCC
AAGGCTGCGGATACCCTGACCATTTTTGGTGATGAGTACACAGCGATTGTTAAGGAAGCTTTTGAAAACCGCTGGATTGA
TGTCCATGAAAACGAAGGCAAACGCTCGGGAGCTTATTCTGGAGGTGCCTATGACACCAACGCTTTTATGCTTCTCAACT
GGCAGGACACCTTGGACAATCTCTATACCCTTATTCATGAAACAGGTCATTCCCTCCACTCTATGTTTACCCGTCAGAAC
CAGCCTTATGTCTATGGTCACTACTCTATTTTCTTGGCAGAGATTGCTTCTACAACCAATGAAAACCTCCTGACAGAGAA
ACTCTTGTCAGAAGTAGAAGATGATAAGACACGCTTTGCTATTCTCAACCACTACCTAGATGGTTTCAGAGGGACAGTCT
TCCGTCAAACCCAGTTTGCAGAGTTTGAGCAAGCAATTTATACGGCCGATCAAGAAGGTCAAGTTTTGACAGCAGATTTC
CTCAGTCAGCTCTATGCAGAACTCAACCAAAAATATTATGGACTTTCTGCGGAAGACAATCCTGAAATCCAGTACGAGTG
GGCGCGGATTCCACATTTCTACTACAATTTCTACGTTTACCAATATTCAACTGGCTTTGCGGCAGCGTCAGCTCTTTCAG
ACAAGATTGTCAATGGTAGTCCAGAAGACAAGGAAAACTACCTAGATTACCTCAAGGCAGGAAGCTCTGATTATCCGCTT
GAAGTTATGAAAAAAGCAGGCGTAGACATGACCAAGGAAGACTATCTCAATGATGCCTTCAAGGTCTTTGAAGCCCGCTT
GACAGAGTTGGAAGCTCTTGTTGAGAAAGGTGTGCATTTGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.667

100

0.697