Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   J9537_RS09520 Genome accession   NZ_CP072888
Coordinates   1943996..1945264 (-) Length   422 a.a.
NCBI ID   WP_218255947.1    Uniprot ID   -
Organism   Enterococcus raffinosus strain F162_2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1938996..1950264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9537_RS09515 (J9537_09515) - 1939553..1943896 (-) 4344 WP_218255945.1 PolC-type DNA polymerase III -
  J9537_RS09520 (J9537_09520) eeP 1943996..1945264 (-) 1269 WP_218255947.1 RIP metalloprotease RseP Regulator
  J9537_RS09525 (J9537_09525) - 1945440..1946234 (-) 795 WP_218255948.1 phosphatidate cytidylyltransferase -
  J9537_RS09530 (J9537_09530) - 1946231..1947031 (-) 801 WP_218255950.1 isoprenyl transferase -
  J9537_RS09535 (J9537_09535) frr 1947222..1947779 (-) 558 WP_010746062.1 ribosome recycling factor -
  J9537_RS09540 (J9537_09540) pyrH 1947781..1948503 (-) 723 WP_010746061.1 UMP kinase -
  J9537_RS09545 (J9537_09545) tsf 1948632..1949516 (-) 885 WP_010746060.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46070.84 Da        Isoelectric Point: 7.1458

>NTDB_id=556645 J9537_RS09520 WP_218255947.1 1943996..1945264(-) (eeP) [Enterococcus raffinosus strain F162_2]
MRTIITFLIVFGVLVIVHEFGHFFFAKRAGILVREFSIGMGPKLIAHMGKDGTTYTLRLLPIGGYVRMAGLEDEETELSP
GMPLSVELTSKNEVHRINTSKKIQLPNSIPMELISADLVDELVIKGYVNGDESQETTYKVQHNATVIEESGTEVRIAPRD
VQFQSAKLGSRILTNFAGPMNNFILTVLLFIALAFLQGGVANYDTNQIGTVQAGSPAAAAGLKDHDTILSVDGKKISTWD
DLTNTVTKKPGKELTIIAEHDGKEKTMQMIPKSVKSNGEKVGQIGVTPYMKTGFGDKVIGGLTQSWDMVKRIFGALGSLF
TGFSLDKLGGPVMMYQMSAEASRAGVKTVIYLMALLSVNLGIVNLLPIPAFDGGKILLNFIEGVRGKPLDPDKEGMITMI
GFGFIMLLMILVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=556645 J9537_RS09520 WP_218255947.1 1943996..1945264(-) (eeP) [Enterococcus raffinosus strain F162_2]
ATGCGTACTATTATTACGTTTTTAATTGTATTTGGGGTTCTTGTAATCGTTCATGAGTTTGGACATTTTTTCTTTGCAAA
ACGTGCAGGGATTTTGGTTCGTGAATTTTCGATTGGCATGGGACCTAAACTAATTGCTCATATGGGAAAAGATGGAACTA
CTTATACTTTGCGATTATTGCCGATTGGCGGGTATGTACGAATGGCAGGATTAGAAGATGAAGAAACAGAACTGAGCCCA
GGAATGCCATTATCTGTGGAATTAACTTCTAAAAATGAGGTTCATCGAATCAATACCAGTAAGAAAATTCAGTTACCAAA
TAGTATTCCAATGGAGTTGATTTCGGCCGACTTAGTGGATGAGCTTGTTATCAAAGGATACGTGAATGGTGATGAAAGTC
AAGAGACGACTTATAAGGTTCAGCATAATGCGACTGTGATTGAAGAGAGTGGAACAGAAGTCCGAATTGCCCCGCGGGAT
GTTCAGTTTCAATCTGCCAAGTTGGGTTCAAGAATCTTGACAAATTTTGCTGGTCCGATGAATAATTTTATATTAACGGT
TCTATTGTTTATTGCTTTAGCATTTCTGCAAGGTGGAGTAGCAAATTACGATACTAATCAAATTGGGACTGTGCAAGCTG
GTAGTCCAGCAGCGGCTGCTGGTCTTAAAGATCATGATACAATTCTTTCAGTAGATGGAAAAAAGATTTCCACTTGGGAT
GATCTAACCAATACAGTTACTAAGAAACCCGGAAAAGAATTAACTATCATAGCAGAACATGATGGCAAAGAAAAAACAAT
GCAAATGATACCAAAGAGTGTGAAGAGTAATGGTGAAAAAGTAGGACAAATTGGTGTAACACCTTACATGAAGACAGGCT
TTGGGGATAAAGTGATTGGTGGTTTAACTCAATCATGGGATATGGTTAAAAGAATTTTCGGTGCCTTAGGGTCACTATTT
ACTGGGTTTAGTTTAGACAAGCTGGGTGGACCGGTGATGATGTATCAAATGTCAGCCGAAGCATCGCGTGCAGGAGTTAA
AACAGTCATCTACTTAATGGCGTTATTATCCGTTAATTTGGGTATTGTTAATTTGCTTCCTATTCCGGCTTTTGATGGTG
GTAAAATATTGCTGAATTTTATTGAGGGTGTTCGTGGAAAACCACTTGATCCAGACAAAGAAGGTATGATTACCATGATT
GGATTTGGATTTATCATGCTTTTGATGATATTGGTTACATGGAATGATATTCAGCGTTTCTTCTTTTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(208-268)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

50.935

100

0.517
  eeP Streptococcus thermophilus LMD-9

50.701

100

0.514