Detailed information NTG0556473

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: L1A14_RS02215
• Genome accession: NZ_CP090883
• Coordinates: 414918..417284 (-)
• Length: 788 a.a.
• NCBI ID: WP_000454482.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain LE4448
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 409918..422284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1A14_RS02185 (L1A14_02185)	vraR	410270..410902 (+)	633	WP_000698438.1	response regulator transcription factor	Regulator
L1A14_RS02190 (L1A14_02190)	-	410978..411672 (+)	695	Protein_417	DNA alkylation repair protein	-
L1A14_RS02195 (L1A14_02195)	-	411822..412061 (+)	240	WP_000754501.1	hypothetical protein	-
L1A14_RS02200 (L1A14_02200)	cbpG	412142..412732 (+)	591	Protein_419	choline-binding protein CbpG	-
L1A14_RS02205 (L1A14_02205)	-	413034..413426 (+)	393	WP_000378125.1	tyrosine-type recombinase/integrase	-
L1A14_RS02210 (L1A14_02210)	tig	413587..414870 (+)	1284	WP_000116468.1	trigger factor	-
L1A14_RS02215 (L1A14_02215)	recD/recD2/recDB	414918..417284 (-)	2367	WP_000454482.1	ATP-dependent RecD-like DNA helicase	Machinery gene
L1A14_RS02220 (L1A14_02220)	lepB	417411..418025 (-)	615	WP_001083986.1	signal peptidase I	-
L1A14_RS02225 (L1A14_02225)	rnhC	418029..418910 (-)	882	WP_000146855.1	ribonuclease HIII	-
L1A14_RS02230 (L1A14_02230)	zapA	418997..419299 (+)	303	WP_000002019.1	cell division protein ZapA	-
L1A14_RS02235 (L1A14_02235)	-	419296..419844 (+)	549	WP_000622953.1	CvpA family protein	-
L1A14_RS02240 (L1A14_02240)	mutS/mutS2	419948..422284 (+)	2337	WP_001035034.1	endonuclease MutS2	Machinery gene

Sequence

Protein

• Length: 788 a.a.
• Molecular weight: 88696.57 Da
• Isoelectric Point: 4.5836

>NTDB_id=556473 L1A14_RS02215 WP_000454482.1 414918..417284(-) (recD/recD2/recDB) [Streptococcus pneumoniae strain LE4448]
MEVYFSGTIERIIFENPSNFYRILLLEIDDTDAEDFDDFEIIVTGTMADVIEGEDYTFWGQIVQHSKYGEQLQISRYDRA
KPTSKGLVKYFSSSHFKGIGLKTAQKIVDTYGENTIDEILQHPEKLEGIAGLSAKNREAFVSTLRLNYGTEMILAKLANY
GIPNKLAFQIQDFYKEETLDVVENYPYQLVEDIKGLGFTIADQLAEELGIESQAPERFRAGLVHSLFQTCMETGDTYVEA
RDLLEQTLTLLESSRPVELDPSQVAQELSYLIEEDKVQQIDTKIFDNSLFFAEEGIRSHLIRILEKGKQKSQDLETIQKH
ITTVEQELGIEYDNIQKQAICDAIQNKVFILTGGPGTGKTTVINGIIAVYALLEGLDFRKKNNLPILLAAPTGRAARRMN
ELTGLPSATIHRHLGMTGDDDTSHLEDYLDADFIIVDEFSMVDTWLANQLFSNISSNSKILIVGDSDQLPSVSPGQVLAD
LLHIPLIPQTRLEKIYRQSKESTIVTLASQIRQGILPADFTQKKADRSYFEIASGHIPATIEKILGAALRNGIPARDIQV
LAPMYRGTAGIDAINQLMQDLLNPPQKDQLSFEAPQCHYRKRDKVIHLVNDAEINVFNGDLGAITDLIPGKYTESKQDEI
VIDFDGNEVSYPRNEWYKIRLAYAMSIHKSQGSEFPVVILPITSASRRMLERNLIYTAITRAKSKLILLGELQAFDYATQ
HIGTARKTYLIERFSDLLENVEEKQQAVSETVTSSASEQSYILTEENWDRIPAMIGITDTDLKEIFGK

Nucleotide

• Length: 2367 bp

>NTDB_id=556473 L1A14_RS02215 WP_000454482.1 414918..417284(-) (recD/recD2/recDB) [Streptococcus pneumoniae strain LE4448]
ATGGAAGTTTATTTTTCAGGAACTATTGAACGGATTATTTTTGAAAATCCCAGCAATTTTTATCGCATCCTCCTCCTAGA
AATCGACGATACGGACGCAGAGGATTTTGATGATTTTGAAATCATTGTCACAGGAACCATGGCTGATGTAATTGAGGGCG
AAGACTATACTTTTTGGGGGCAAATTGTCCAGCACTCCAAGTATGGAGAACAACTGCAAATCAGTCGTTATGATCGCGCA
AAACCAACTAGTAAGGGCTTGGTCAAGTACTTTTCAAGTAGCCATTTCAAGGGGATTGGTCTCAAGACAGCTCAGAAAAT
CGTGGATACCTATGGCGAAAATACCATTGACGAAATTTTGCAACACCCAGAAAAGTTAGAAGGCATCGCAGGACTCTCTG
CCAAAAATCGCGAGGCTTTCGTCTCCACTCTCCGTCTCAACTACGGAACGGAGATGATTTTGGCCAAACTAGCCAACTAC
GGCATTCCCAACAAACTAGCCTTTCAGATTCAAGACTTTTACAAGGAAGAAACCCTTGATGTGGTTGAAAATTATCCCTA
CCAACTGGTTGAGGATATCAAGGGTTTGGGCTTTACCATTGCTGACCAACTAGCTGAGGAACTAGGCATCGAAAGTCAGG
CTCCTGAACGCTTCCGCGCCGGTCTAGTTCACAGTCTTTTTCAGACCTGTATGGAAACAGGGGACACCTATGTTGAAGCA
CGGGATTTGCTGGAACAAACCCTTACTCTCCTTGAGTCTTCCCGTCCCGTGGAACTAGACCCCAGCCAAGTTGCCCAAGA
GCTCTCCTACCTGATCGAAGAAGACAAGGTTCAGCAGATTGATACCAAGATCTTTGACAACAGCCTCTTTTTCGCTGAGG
AAGGTATCCGCAGTCACTTGATTCGTATCCTTGAAAAAGGAAAACAGAAGAGCCAAGATTTAGAAACTATTCAAAAGCAT
ATCACTACTGTCGAGCAAGAACTGGGGATTGAGTATGATAACATTCAAAAACAAGCTATTTGTGACGCTATCCAGAACAA
GGTCTTTATCCTGACAGGTGGGCCTGGTACTGGTAAGACAACTGTTATCAATGGAATCATCGCTGTTTATGCCCTTTTAG
AAGGACTTGACTTCAGGAAGAAAAACAATCTGCCCATTCTTCTTGCTGCTCCAACTGGTCGAGCTGCTCGTCGCATGAAT
GAATTGACAGGTTTGCCTAGCGCGACCATACATCGCCACTTGGGAATGACAGGTGACGATGATACCAGTCATCTGGAAGA
TTACCTAGATGCTGACTTTATCATCGTGGATGAATTCTCTATGGTGGATACTTGGCTGGCCAATCAACTCTTCTCCAATA
TCTCTTCTAACAGTAAGATCCTCATCGTAGGTGACAGTGATCAGCTACCTTCTGTCAGTCCTGGACAGGTTCTAGCGGAT
CTGCTTCATATTCCTTTGATTCCTCAGACTCGCTTGGAAAAAATTTATCGACAAAGCAAAGAATCAACCATCGTCACCCT
AGCTAGTCAGATTCGACAGGGCATCTTGCCAGCTGATTTCACCCAAAAAAAAGCTGACCGTTCCTACTTTGAAATTGCTA
GTGGCCATATTCCTGCCACCATTGAAAAAATCTTAGGTGCCGCCCTCAGAAATGGTATTCCTGCCCGTGATATCCAAGTT
CTGGCTCCTATGTACCGAGGGACGGCAGGGATTGATGCTATCAATCAGCTCATGCAAGACCTGCTCAATCCCCCACAAAA
AGATCAACTCAGTTTTGAAGCTCCTCAGTGCCACTATCGTAAGAGAGACAAGGTCATTCATTTGGTTAACGATGCTGAAA
TCAATGTCTTTAATGGGGATTTAGGAGCTATCACAGACCTGATTCCTGGTAAATACACCGAATCGAAACAAGACGAGATT
GTCATTGATTTTGATGGTAATGAAGTCTCTTACCCCCGTAACGAATGGTACAAGATTCGCTTGGCCTATGCCATGAGTAT
TCATAAGTCTCAGGGAAGTGAGTTCCCAGTTGTCATCCTACCGATTACTAGTGCTAGCCGACGTATGCTGGAGCGAAATC
TCATCTACACAGCCATTACACGTGCCAAAAGCAAACTCATCTTACTAGGCGAATTACAAGCCTTCGACTATGCTACCCAA
CACATCGGAACTGCCCGAAAAACCTATCTGATTGAACGCTTCAGTGATCTACTGGAGAATGTTGAAGAAAAGCAACAAGC
TGTCTCTGAAACAGTCACATCAAGTGCCTCTGAACAATCCTACATCCTAACCGAAGAAAACTGGGACCGCATCCCAGCCA
TGATTGGGATTACAGACACAGACCTCAAAGAGATTTTTGGAAAATAG

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (148-237)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (574-644)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (662-709)

• AAA domain (AAA_30) (332-520)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	40.885	97.462	0.398