Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   M3B_RS02070 Genome accession   NZ_AP014596
Coordinates   400416..401450 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain M3-b     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 395416..406450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3B_RS02040 (M3B_0416) tsaE 396481..396942 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M3B_RS02045 (M3B_0417) - 396917..397441 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  M3B_RS02050 (M3B_0418) brpA 397450..398733 (+) 1284 WP_096404057.1 biofilm formation/cell division transcriptional regulator BrpA -
  M3B_RS02055 (M3B_0419) - 398844..399200 (-) 357 WP_002988657.1 hypothetical protein -
  M3B_RS02060 (M3B_0420) - 399197..399616 (-) 420 WP_002983376.1 HIT family protein -
  M3B_RS02065 (M3B_0421) pptA 399688..400413 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  M3B_RS02070 (M3B_0422) pptB 400416..401450 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  M3B_RS02075 (M3B_0423) ccrZ 401514..402305 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  M3B_RS02080 (M3B_0424) trmB 402305..402940 (+) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  M3B_RS02090 (M3B_0426) rimP 403199..403735 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  M3B_RS02095 (M3B_0427) nusA 403910..405067 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  M3B_RS02100 (M3B_0428) rnpM 405083..405379 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  M3B_RS02105 (M3B_0429) - 405372..405674 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=55642 M3B_RS02070 WP_010922583.1 400416..401450(+) (pptB) [Streptococcus pyogenes strain M3-b]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=55642 M3B_RS02070 WP_010922583.1 400416..401450(+) (pptB) [Streptococcus pyogenes strain M3-b]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427


Multiple sequence alignment