Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   J9319_RS15370 Genome accession   NZ_CP072851
Coordinates   2921507..2921647 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain 6ww6     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2916507..2926647
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9319_RS15345 (J9319_15345) - 2916842..2917231 (-) 390 WP_008345855.1 hotdog fold thioesterase -
  J9319_RS15350 (J9319_15350) comA 2917255..2917896 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  J9319_RS15355 (J9319_15355) comP 2917977..2920268 (-) 2292 WP_116306137.1 ATP-binding protein Regulator
  J9319_RS15360 (J9319_15360) comX 2920275..2920463 (-) 189 WP_306160900.1 competence pheromone ComX -
  J9319_RS15365 (J9319_15365) - 2920432..2921355 (-) 924 WP_210552196.1 polyprenyl synthetase family protein -
  J9319_RS15370 (J9319_15370) degQ 2921507..2921647 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  J9319_RS15375 (J9319_15375) - 2922153..2922506 (+) 354 WP_019744042.1 hypothetical protein -
  J9319_RS15380 (J9319_15380) - 2922543..2923769 (-) 1227 WP_210552474.1 HDOD domain-containing protein -
  J9319_RS15385 (J9319_15385) - 2923910..2925379 (-) 1470 WP_017358937.1 nicotinate phosphoribosyltransferase -
  J9319_RS15390 (J9319_15390) - 2925397..2925948 (-) 552 WP_008345872.1 isochorismatase family cysteine hydrolase -
  J9319_RS15395 (J9319_15395) - 2926009..2926416 (-) 408 WP_041091828.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=556393 J9319_RS15370 WP_003213123.1 2921507..2921647(-) (degQ) [Bacillus altitudinis strain 6ww6]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=556393 J9319_RS15370 WP_003213123.1 2921507..2921647(-) (degQ) [Bacillus altitudinis strain 6ww6]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAACTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696