Detailed information NTG0556134

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J9B93_RS16825
• Genome accession: NZ_CP072843
• Coordinates: 3424787..3425950 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain VY03
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3419787..3430950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9B93_RS16795 (J9B93_16795)	-	3420052..3420471 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
J9B93_RS16800 (J9B93_16800)	comFC	3420545..3421234 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
J9B93_RS16805 (J9B93_16805)	-	3421240..3421524 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
J9B93_RS16810 (J9B93_16810)	comFA	3421582..3422967 (-)	1386	WP_044052858.1	DEAD/DEAH box helicase	Machinery gene
J9B93_RS16815 (J9B93_16815)	-	3423075..3423923 (-)	849	WP_044052857.1	DegV family protein	-
J9B93_RS16820 (J9B93_16820)	degU	3424021..3424710 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
J9B93_RS16825 (J9B93_16825)	degS	3424787..3425950 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
J9B93_RS16830 (J9B93_16830)	-	3426173..3426820 (+)	648	WP_003151384.1	YigZ family protein	-
J9B93_RS16835 (J9B93_16835)	-	3426825..3428039 (+)	1215	WP_003151383.1	LCP family protein	-
J9B93_RS16840 (J9B93_16840)	-	3428129..3429205 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
J9B93_RS16845 (J9B93_16845)	tuaH	3429338..3430534 (-)	1197	WP_044052856.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=556134 J9B93_RS16825 WP_003151385.1 3424787..3425950(-) (degS) [Bacillus velezensis strain VY03]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=556134 J9B93_RS16825 WP_003151385.1 3424787..3425950(-) (degS) [Bacillus velezensis strain VY03]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948