Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   J9262_RS04145 Genome accession   NZ_CP072825
Coordinates   798801..799397 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain IRQBAS103c     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 793801..804397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J9262_RS04130 (J9262_04130) helD 794009..796063 (-) 2055 WP_117260053.1 DNA helicase IV -
  J9262_RS04135 (J9262_04135) - 796188..796634 (+) 447 WP_002898425.1 YccF domain-containing protein -
  J9262_RS04140 (J9262_04140) yccS 796652..798787 (+) 2136 WP_065900027.1 YccS family putative transporter -
  J9262_RS04145 (J9262_04145) sxy/tfoX 798801..799397 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  J9262_RS04150 (J9262_04150) sulA 799746..800255 (+) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  J9262_RS04155 (J9262_04155) ompA 800608..801678 (+) 1071 WP_002898408.1 porin OmpA -
  J9262_RS04160 (J9262_04160) matP 801810..802262 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  J9262_RS04165 (J9262_04165) - 802448..804205 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=555965 J9262_RS04145 WP_004150836.1 798801..799397(-) (sxy/tfoX) [Klebsiella pneumoniae strain IRQBAS103c]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=555965 J9262_RS04145 WP_004150836.1 798801..799397(-) (sxy/tfoX) [Klebsiella pneumoniae strain IRQBAS103c]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51