Detailed information NTG0555864

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J8615_RS17395
• Genome accession: NZ_CP072791
• Coordinates: 3502072..3503235 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GS-1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3497072..3508235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J8615_RS17365 (J8615_17355)	-	3497337..3497756 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
J8615_RS17370 (J8615_17360)	comFC	3497830..3498519 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
J8615_RS17375 (J8615_17365)	-	3498525..3498809 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
J8615_RS17380 (J8615_17370)	comFA	3498867..3500252 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
J8615_RS17385 (J8615_17375)	-	3500360..3501208 (-)	849	WP_043867471.1	DegV family protein	-
J8615_RS17390 (J8615_17380)	degU	3501306..3501995 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
J8615_RS17395 (J8615_17385)	degS	3502072..3503235 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
J8615_RS17400 (J8615_17390)	-	3503457..3504104 (+)	648	WP_003151384.1	YigZ family protein	-
J8615_RS17405 (J8615_17395)	-	3504109..3505323 (+)	1215	WP_003151383.1	LCP family protein	-
J8615_RS17410 (J8615_17400)	-	3505413..3506489 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
J8615_RS17415 (J8615_17405)	-	3506622..3507818 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=555864 J8615_RS17395 WP_003151385.1 3502072..3503235(-) (degS) [Bacillus velezensis strain GS-1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=555864 J8615_RS17395 WP_003151385.1 3502072..3503235(-) (degS) [Bacillus velezensis strain GS-1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948