Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   LZ559_RS15250 Genome accession   NZ_CP090837
Coordinates   3452743..3453867 (+) Length   374 a.a.
NCBI ID   WP_030720812.1    Uniprot ID   A0ABM9H8R5
Organism   Streptomyces sp. R527F     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3447743..3458867
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ559_RS15235 (LZ559_15235) - 3448145..3449008 (+) 864 WP_030808923.1 hypothetical protein -
  LZ559_RS15240 (LZ559_15240) - 3449111..3451030 (-) 1920 WP_234876836.1 hypothetical protein -
  LZ559_RS15245 (LZ559_15245) radA/sms 3451250..3452662 (+) 1413 WP_030808917.1 DNA repair protein RadA Machinery gene
  LZ559_RS15250 (LZ559_15250) disA 3452743..3453867 (+) 1125 WP_030720812.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  LZ559_RS15255 (LZ559_15255) - 3454383..3455126 (-) 744 WP_073779925.1 hypothetical protein -
  LZ559_RS15260 (LZ559_15260) - 3455432..3456346 (+) 915 WP_030581677.1 A/G-specific adenine glycosylase -
  LZ559_RS15265 (LZ559_15265) - 3456541..3457212 (+) 672 WP_030808911.1 SigE family RNA polymerase sigma factor -
  LZ559_RS15270 (LZ559_15270) - 3457299..3457967 (+) 669 WP_010063770.1 hypothetical protein -
  LZ559_RS15275 (LZ559_15275) cseB 3458002..3458715 (+) 714 WP_030720798.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40398.32 Da        Isoelectric Point: 4.9406

>NTDB_id=555561 LZ559_RS15250 WP_030720812.1 3452743..3453867(+) (disA) [Streptomyces sp. R527F]
MAANDRATTPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKACGFPVVSVSQSMRLIAVYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=555561 LZ559_RS15250 WP_030720812.1 3452743..3453867(+) (disA) [Streptomyces sp. R527F]
GTGGCAGCCAACGACCGGGCGACGACGCCCGGAAAGTCCGGCCAAGGCACCGGTAACGAGGCGCTGATGCGCGCCTCGCT
GAGCGCGGTCGCGCCCGGTATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAATACCGGTGGCCTGATCGTGC
TGGGCATGGACCGGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGGGTGCAGCTGGTCCC
GGACGCCTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGTTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGGTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTGTCCCGGGCCAATCAGGCGCTCGCCACGCTGGAGCGGTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCAGTGGCGCAGCGCCTGGAGATGGTGCGGCGGATCG
CGACGGAGATCGCGGAGTATGTGGTCGAGCTCGGCACCGACGGACGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCG
GGGGTGGAGCCGGAGCGGGAGCTGGTGGTCCGGGATTACGTCCCCGAGCCGACGGCGAAACGGTCGCGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCCCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGAGCCCTGGGCTACAGCG
GCTCGCCGGAGACCCTGGACTCGGCAGTGTCCCCGAGGGGCTTCCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGTGGTCTGCAGAAGCTGCTGGCCGCCAGTGTTGACGATCTCCAGACGGTGGA
CGGGGTGGGCGAGGCGCGGGCGCGGAGTGTCCGTGAGGGCCTGTCGCGACTGGCGGAGTCGTCGATCCTGGAACGCTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433