Detailed information NTG0055510

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: SMUNUM_RS02380
• Genome accession: NZ_AP014571
• Coordinates: 457247..459631 (+)
• Length: 794 a.a.
• NCBI ID: WP_002268938.1
• Uniprot ID: -
• Organism: Streptococcus mutans LP13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 452247..464631

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUNUM_RS02360 (SMNUM_0420)	luxS	453549..454031 (-)	483	WP_002263047.1	S-ribosylhomocysteine lyase	Regulator
SMUNUM_RS02365 (SMNUM_0421)	-	454176..455783 (+)	1608	WP_002263046.1	ribonuclease Y	-
SMUNUM_RS02370 (SMNUM_0422)	gmk	456232..456864 (+)	633	WP_002268937.1	guanylate kinase	-
SMUNUM_RS02375 (SMNUM_0423)	rpoZ	456888..457205 (+)	318	WP_002266355.1	DNA-directed RNA polymerase subunit omega	-
SMUNUM_RS02380 (SMNUM_0424)	priA	457247..459631 (+)	2385	WP_002268938.1	primosomal protein N'	Machinery gene
SMUNUM_RS02385 (SMNUM_0425)	fmt	459691..460626 (+)	936	WP_002263042.1	methionyl-tRNA formyltransferase	-
SMUNUM_RS02390 (SMNUM_0426)	rsmB	460607..461929 (+)	1323	WP_002282801.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
SMUNUM_RS02395 (SMNUM_0427)	-	461968..462711 (+)	744	WP_002282802.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
SMUNUM_RS02400 (SMNUM_0428)	pknB	462708..464558 (+)	1851	WP_002296942.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 90470.54 Da
• Isoelectric Point: 9.6879

>NTDB_id=55510 SMUNUM_RS02380 WP_002268938.1 457247..459631(+) (priA) [Streptococcus mutans LP13]
MTKIAKVIVDVPLMQTDKPFSYKIPEALLSVITAGSRVHVPFGKGNRLLQGFVVSVDSGSAQHLKTIIDVLDVEPVLNQE
QLELADQMRKTVFSYKVSILKSMIPNLLNSNYDRLLKPKKGLSQEEKDLIFAGKKQINFSQLNQEIQTKSLSLIQAGKID
IEYLAKDRKTIKTQKCYDVNLEKLSHLLINKRAKKRQELKDYLANHPQSGPLSDLYRLFSREVVHYFIKEAVLNISQVEV
NRTQSYFENIIQSDFLDLNPEQQTAVEQITAAIGSSNKPYLLEGITGSGKTEVYLHVIDQTLKLGKTAIVLVPEISLTPQ
MTSRFISRFGSQVAIMHSGLSDGEKFDEWRKMKSNQAKVVVGARSAIFSPLKNIGAIIIDEEHEATYKQESSPRYHAREV
ALLRAQYHQAVLVLGSATPSIESRARASRGVYNFLQLSQRANPQAHIPKVKIVDFRDYIGQQKVSNLTPVLLDKIKDRLI
KKEQVVLMLNRRGYSSFIMCRDCGYVDNCPNCDISLTLHMDTKTMNCHYCGFLKGIPYNCPNCQSRQIRYYGTGTQKAYD
ELKQVLPEARILRMDVDTTKRKGAHEKILTKFGRHEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERTFQ
LLTQVAGRAGRANKPGEVLIQTYNPNHYAIQLAREQDYEAFYRYEMRIRKALSYPPYYFTVGLTLSHKDEQEVIKKSYEI
VTLIKEGLTDKIKILGPTPKPVARTHNLYHYQIIIKYRFEDQLEIVLNHILDLTQAKENKKLRLIIDHEPQSFM

Nucleotide

• Length: 2385 bp

>NTDB_id=55510 SMUNUM_RS02380 WP_002268938.1 457247..459631(+) (priA) [Streptococcus mutans LP13]
ATGACAAAAATTGCAAAGGTCATTGTAGATGTGCCCTTAATGCAAACAGATAAACCCTTTTCTTATAAAATTCCAGAGGC
ATTATTATCAGTGATTACAGCAGGTTCACGTGTTCATGTTCCTTTTGGTAAAGGAAATCGATTATTACAAGGGTTTGTAG
TAAGTGTAGATAGTGGATCAGCTCAGCATTTAAAAACAATTATTGACGTTTTAGATGTGGAACCGGTGCTTAATCAGGAG
CAGTTGGAATTAGCAGATCAAATGCGTAAAACGGTTTTTTCTTATAAGGTTTCTATTTTGAAATCAATGATTCCAAATCT
CTTAAATTCTAATTATGATCGTTTGCTGAAACCTAAAAAAGGGCTATCTCAGGAAGAAAAGGACTTAATTTTTGCTGGTA
AAAAACAAATAAATTTTTCGCAACTGAATCAAGAAATACAGACTAAAAGTTTAAGCTTGATACAGGCTGGTAAAATTGAT
ATAGAATATTTAGCCAAGGATAGAAAGACAATTAAAACGCAAAAATGTTATGATGTTAATCTTGAAAAGTTATCTCATCT
TCTTATCAATAAGCGAGCTAAAAAGCGACAAGAACTGAAAGATTATCTTGCTAATCATCCGCAGTCCGGTCCTCTTTCGG
ATCTGTATCGGCTTTTTTCAAGAGAGGTTGTTCATTATTTTATAAAAGAAGCTGTTCTCAATATTTCACAAGTAGAAGTG
AATCGTACCCAAAGCTATTTTGAAAATATTATTCAATCTGATTTTCTTGATTTAAACCCAGAACAGCAAACAGCAGTAGA
GCAAATAACAGCTGCTATTGGTTCTTCTAATAAGCCTTATCTGCTTGAAGGAATTACAGGAAGCGGAAAAACAGAGGTCT
ATCTCCATGTTATTGATCAGACTTTGAAATTAGGTAAAACAGCCATTGTTCTAGTTCCTGAGATTTCGTTAACACCTCAG
ATGACTAGTCGCTTTATTTCTCGCTTTGGCAGTCAAGTTGCTATCATGCATTCGGGCTTGTCTGATGGTGAAAAATTTGA
TGAGTGGCGTAAAATGAAATCCAATCAAGCTAAAGTTGTTGTTGGAGCGCGCTCAGCTATTTTCTCTCCTTTAAAAAATA
TTGGTGCTATCATTATTGATGAAGAGCACGAGGCAACTTATAAACAAGAGTCTAGTCCACGCTATCATGCGCGGGAGGTG
GCACTATTGCGTGCCCAATATCATCAGGCAGTTTTAGTCTTAGGCAGTGCGACGCCATCTATTGAGAGCCGAGCGCGAGC
CAGCCGTGGTGTTTATAACTTCCTGCAGCTAAGTCAAAGGGCCAATCCTCAAGCACACATTCCCAAGGTAAAAATTGTAG
ATTTTCGTGATTATATCGGTCAGCAAAAAGTGAGTAATTTAACACCTGTTCTGCTAGATAAAATTAAAGATCGTCTAATA
AAAAAGGAACAGGTCGTTCTTATGCTTAATCGTCGCGGGTATTCTAGTTTTATTATGTGCCGTGACTGCGGTTATGTTGA
TAACTGTCCTAATTGTGATATCTCCTTAACTTTACACATGGATACCAAAACAATGAATTGTCACTATTGTGGCTTTTTAA
AAGGAATTCCTTACAACTGTCCTAATTGTCAAAGTCGGCAAATTCGTTATTATGGAACGGGAACGCAAAAAGCTTATGAT
GAATTAAAACAAGTTTTGCCAGAAGCACGCATTTTACGGATGGATGTTGATACAACCAAAAGAAAGGGAGCGCATGAGAA
GATTCTGACGAAATTTGGTCGTCATGAAGCTGATATTCTTTTAGGAACGCAAATGATTGCCAAAGGACTTGATTTTCCTA
ATGTTACTTTGGTTGGTGTATTAAATGCAGATACTTCACTTAATTTGCCGGATTTTCGCTCAAGTGAGCGTACTTTTCAA
CTTTTAACACAGGTGGCAGGACGCGCAGGCCGTGCAAATAAACCGGGTGAGGTTTTGATTCAAACCTATAATCCTAATCA
TTATGCTATTCAGTTGGCAAGGGAACAGGACTATGAAGCTTTTTATCGCTACGAAATGAGAATTCGTAAGGCACTTTCCT
ACCCACCCTACTATTTCACAGTTGGCTTAACTCTATCACATAAAGATGAGCAAGAGGTTATCAAAAAATCTTATGAGATA
GTGACGTTGATCAAGGAAGGACTGACAGATAAGATTAAAATATTGGGTCCAACACCCAAACCTGTCGCTAGGACGCATAA
TCTTTATCATTATCAAATTATCATTAAGTATCGTTTTGAAGACCAGTTGGAGATTGTTTTAAATCATATTTTAGATTTAA
CTCAAGCTAAAGAAAATAAAAAGTTACGTTTGATTATTGATCATGAGCCACAAAGTTTTATGTAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (257-420)

• Primosomal protein N C-terminal domain (PriA_C) (696-790)

• Helicase conserved C-terminal domain (Helicase_C) (568-653)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-105)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (509-532)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	46.724	100	0.476