Detailed information NTG0554607

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J8G07_RS06480
• Genome accession: NZ_CP072612
• Coordinates: 1278025..1279188 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus amyloliquefaciens strain G10
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1273025..1284188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J8G07_RS06460	-	1273465..1274661 (+)	1197	WP_032876154.1	glycosyltransferase	-
J8G07_RS06465	-	1274794..1275870 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
J8G07_RS06470	-	1275969..1277150 (-)	1182	WP_032876157.1	LCP family protein	-
J8G07_RS06475	-	1277155..1277802 (-)	648	WP_007614107.1	YigZ family protein	-
J8G07_RS06480	degS	1278025..1279188 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
J8G07_RS06485	degU	1279265..1279954 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
J8G07_RS06490	-	1280052..1280900 (+)	849	WP_032876160.1	DegV family protein	-
J8G07_RS06495	comFA	1281009..1282394 (+)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
J8G07_RS06500	-	1282452..1282736 (+)	285	WP_003151389.1	competence protein ComFB	-
J8G07_RS06505	comFC	1282742..1283431 (+)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
J8G07_RS06510	-	1283505..1283924 (+)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=554607 J8G07_RS06480 WP_007407484.1 1278025..1279188(+) (degS) [Bacillus amyloliquefaciens strain G10]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=554607 J8G07_RS06480 WP_007407484.1 1278025..1279188(+) (degS) [Bacillus amyloliquefaciens strain G10]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951