Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   J6600_RS14750 Genome accession   NZ_CP072563
Coordinates   3031358..3031498 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus sp. LJBV19     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3026358..3036498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6600_RS14725 (J6600_14725) - 3026672..3027055 (-) 384 WP_065180456.1 hotdog fold thioesterase -
  J6600_RS14730 (J6600_14730) comA 3027077..3027721 (-) 645 WP_209387546.1 response regulator transcription factor Regulator
  J6600_RS14735 (J6600_14735) comP 3027802..3030153 (-) 2352 WP_271259836.1 histidine kinase Regulator
  J6600_RS14740 (J6600_14740) comX 3030131..3030301 (-) 171 WP_032863917.1 competence pheromone ComX -
  J6600_RS14745 (J6600_14745) - 3030301..3031227 (-) 927 WP_014721741.1 polyprenyl synthetase family protein -
  J6600_RS14750 (J6600_14750) degQ 3031358..3031498 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  J6600_RS14755 (J6600_14755) - 3031963..3032304 (+) 342 WP_015418107.1 hypothetical protein -
  J6600_RS14760 (J6600_14760) - 3032311..3033534 (-) 1224 WP_209387547.1 EAL and HDOD domain-containing protein -
  J6600_RS14765 (J6600_14765) - 3033664..3035130 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  J6600_RS14770 (J6600_14770) - 3035148..3035699 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  J6600_RS14775 (J6600_14775) - 3035796..3036194 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=554256 J6600_RS14750 WP_003152043.1 3031358..3031498(-) (degQ) [Bacillus sp. LJBV19]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=554256 J6600_RS14750 WP_003152043.1 3031358..3031498(-) (degQ) [Bacillus sp. LJBV19]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891