Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   J6600_RS01955 Genome accession   NZ_CP072563
Coordinates   392786..393739 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus sp. LJBV19     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 387786..398739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6600_RS01930 (J6600_01930) - 387830..389257 (+) 1428 WP_088056326.1 HAMP domain-containing sensor histidine kinase -
  J6600_RS01935 (J6600_01935) rapC 389416..390564 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  J6600_RS01940 (J6600_01940) phrC 390548..390667 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  J6600_RS01945 (J6600_01945) - 390818..390913 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  J6600_RS01950 (J6600_01950) - 391008..392372 (-) 1365 WP_110085395.1 aspartate kinase -
  J6600_RS01955 (J6600_01955) ceuB 392786..393739 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  J6600_RS01960 (J6600_01960) - 393729..394676 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  J6600_RS01965 (J6600_01965) - 394670..395428 (+) 759 WP_063636991.1 ABC transporter ATP-binding protein -
  J6600_RS01970 (J6600_01970) - 395450..396394 (+) 945 WP_012116805.1 siderophore ABC transporter substrate-binding protein -
  J6600_RS01975 (J6600_01975) - 397747..398598 (+) 852 WP_209387881.1 DUF692 family multinuclear iron-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=554205 J6600_RS01955 WP_015239156.1 392786..393739(+) (ceuB) [Bacillus sp. LJBV19]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=554205 J6600_RS01955 WP_015239156.1 392786..393739(+) (ceuB) [Bacillus sp. LJBV19]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAACAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTGGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCAGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAATTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTTTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCCCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536