Detailed information NTG0554203

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: J6600_RS01935
• Genome accession: NZ_CP072563
• Coordinates: 389416..390564 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus sp. LJBV19
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 384416..395564

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6600_RS01915 (J6600_01915)	-	384816..385499 (-)	684	WP_022552585.1	ABC transporter ATP-binding protein	-
J6600_RS01920 (J6600_01920)	-	385514..386947 (-)	1434	WP_209387880.1	ABC transporter permease	-
J6600_RS01925 (J6600_01925)	-	387160..387843 (+)	684	WP_014416901.1	response regulator transcription factor	-
J6600_RS01930 (J6600_01930)	-	387830..389257 (+)	1428	WP_088056326.1	HAMP domain-containing sensor histidine kinase	-
J6600_RS01935 (J6600_01935)	rapC	389416..390564 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
J6600_RS01940 (J6600_01940)	phrC	390548..390667 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
J6600_RS01945 (J6600_01945)	-	390818..390913 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
J6600_RS01950 (J6600_01950)	-	391008..392372 (-)	1365	WP_110085395.1	aspartate kinase	-
J6600_RS01955 (J6600_01955)	ceuB	392786..393739 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
J6600_RS01960 (J6600_01960)	-	393729..394676 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
J6600_RS01965 (J6600_01965)	-	394670..395428 (+)	759	WP_063636991.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=554203 J6600_RS01935 WP_014304340.1 389416..390564(+) (rapC) [Bacillus sp. LJBV19]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=554203 J6600_RS01935 WP_014304340.1 389416..390564(+) (rapC) [Bacillus sp. LJBV19]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTATGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGT
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568