Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   LZ183_RS06980 Genome accession   NZ_CP090407
Coordinates   1413836..1415122 (+) Length   428 a.a.
NCBI ID   WP_000121122.1    Uniprot ID   Q8NWZ4
Organism   Staphylococcus aureus strain GD4SA159-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1408836..1420122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZ183_RS06950 (LZ183_06935) - 1409231..1409344 (+) 114 WP_001789890.1 hypothetical protein -
  LZ183_RS06955 (LZ183_06940) tsf 1409379..1410260 (+) 882 WP_000201387.1 translation elongation factor Ts -
  LZ183_RS06960 (LZ183_06945) pyrH 1410397..1411119 (+) 723 WP_000057330.1 UMP kinase -
  LZ183_RS06965 (LZ183_06950) frr 1411138..1411692 (+) 555 WP_001280006.1 ribosome recycling factor -
  LZ183_RS06970 (LZ183_06955) - 1412065..1412835 (+) 771 WP_000473705.1 isoprenyl transferase -
  LZ183_RS06975 (LZ183_06960) - 1412842..1413624 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  LZ183_RS06980 (LZ183_06965) eeP 1413836..1415122 (+) 1287 WP_000121122.1 RIP metalloprotease RseP Regulator
  LZ183_RS06985 (LZ183_06970) - 1415142..1416845 (+) 1704 WP_000814088.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 428 a.a.        Molecular weight: 48135.51 Da        Isoelectric Point: 9.5401

>NTDB_id=553974 LZ183_RS06980 WP_000121122.1 1413836..1415122(+) (eeP) [Staphylococcus aureus strain GD4SA159-1]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASERTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=553974 LZ183_RS06980 WP_000121122.1 1413836..1415122(+) (eeP) [Staphylococcus aureus strain GD4SA159-1]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGCCATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAACCACCAGTC
GAGCCTGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAAGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ACGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCAGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGCTTACAAAAAGGCGATAAAATTGTCCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACAACTGTTAAATTTGAACGTGATGGTAAAACAAAGTCGGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACGTA
CGCTCTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTAGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCGTTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTAGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGATACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains


Predicted by InterProScan.

(191-265)

(9-413)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8NWZ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4

  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395