Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSEST_RS01470 Genome accession   NC_019936
Coordinates   311329..311736 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri RCH2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 306329..316736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSEST_RS01440 (Psest_0291) - 306494..307510 (-) 1017 WP_015275299.1 aspartate carbamoyltransferase catalytic subunit -
  PSEST_RS01445 (Psest_0292) pyrR 307568..308080 (-) 513 WP_015275300.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSEST_RS01450 (Psest_0293) ruvX 308103..308531 (-) 429 WP_015275301.1 Holliday junction resolvase RuvX -
  PSEST_RS01455 (Psest_0294) - 308528..309097 (-) 570 WP_015275302.1 YqgE/AlgH family protein -
  PSEST_RS01460 (Psest_0295) - 309161..310054 (-) 894 WP_015275303.1 energy transducer TonB -
  PSEST_RS01465 (Psest_0296) gshB 310142..311092 (-) 951 WP_015275304.1 glutathione synthase -
  PSEST_RS01470 (Psest_0297) pilG 311329..311736 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  PSEST_RS01475 (Psest_0298) pilH 311780..312145 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  PSEST_RS01480 (Psest_0299) - 312187..312723 (+) 537 WP_015275305.1 chemotaxis protein CheW -
  PSEST_RS01485 (Psest_0300) - 312800..314848 (+) 2049 WP_015275306.1 methyl-accepting chemotaxis protein -
  PSEST_RS01490 (Psest_0301) - 314909..315775 (+) 867 WP_015275307.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=55395 PSEST_RS01470 WP_003282729.1 311329..311736(+) (pilG) [Stutzerimonas stutzeri RCH2]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=55395 PSEST_RS01470 WP_003282729.1 311329..311736(+) (pilG) [Stutzerimonas stutzeri RCH2]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGTACCGCTGAAACCCTGCT
GAAGAAAGTAGGATGCGATGTCATCACCGCAGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGACGGATATCAGACCTGCGCATTGATCAAGAACAACAGCTCCTTCAAG
TCGACGCCAGTCATCATGCTGTCTTCCAAAGATGGCCTGTTCGACAAGGCGAAAGGGCGTATTGTCGGCTCCGATCAATA
CCTTACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCTCATGTCCCTGACTTCGCGCCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment