Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LXE94_RS21120 Genome accession   NZ_CP090125
Coordinates   3985827..3986621 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain Bs96     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3980827..3991621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS21095 (LXE94_21040) - 3981940..3982623 (-) 684 WP_048654834.1 response regulator transcription factor -
  LXE94_RS21100 (LXE94_21045) - 3982835..3983734 (+) 900 WP_041337903.1 PepSY domain-containing protein -
  LXE94_RS21105 (LXE94_21050) - 3983896..3984396 (+) 501 WP_129138048.1 PepSY domain-containing protein -
  LXE94_RS21110 (LXE94_21055) - 3984393..3984522 (-) 130 Protein_4108 hypothetical protein -
  LXE94_RS21115 (LXE94_21060) htrA 3984543..3985745 (-) 1203 WP_129138049.1 serine protease HtrC Regulator
  LXE94_RS21120 (LXE94_21065) vicX 3985827..3986621 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  LXE94_RS21125 (LXE94_21070) walI 3986643..3987485 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  LXE94_RS21130 (LXE94_21075) walH 3987472..3988839 (-) 1368 WP_026113653.1 WalRK two-component regulatory system regulator WalH -
  LXE94_RS21135 (LXE94_21080) walK 3988829..3990664 (-) 1836 WP_017695786.1 cell wall metabolism sensor histidine kinase WalK -
  LXE94_RS21140 (LXE94_21085) walR 3990672..3991379 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=553225 LXE94_RS21120 WP_003226939.1 3985827..3986621(-) (vicX) [Bacillus subtilis strain Bs96]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=553225 LXE94_RS21120 WP_003226939.1 3985827..3986621(-) (vicX) [Bacillus subtilis strain Bs96]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTAATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATTGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAATCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATATGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53