Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | J7T69_RS02325 | Genome accession | NZ_CP072438 |
| Coordinates | 426966..427409 (+) | Length | 147 a.a. |
| NCBI ID | WP_002945408.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain S24733 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 420124..442276 | 426966..427409 | within | 0 |
Gene organization within MGE regions
Location: 420124..442276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J7T69_RS02300 (J7T69_02300) | - | 420124..421332 (+) | 1209 | WP_004197277.1 | CCA tRNA nucleotidyltransferase | - |
| J7T69_RS02305 (J7T69_02305) | - | 421410..423290 (+) | 1881 | WP_138496667.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| J7T69_RS02310 (J7T69_02315) | - | 423372..424412 (-) | 1041 | WP_339328283.1 | AAA family ATPase | - |
| J7T69_RS02315 (J7T69_02320) | gdhA | 424756..426108 (+) | 1353 | WP_011680803.1 | NADP-specific glutamate dehydrogenase | - |
| J7T69_RS02320 (J7T69_02325) | - | 426366..426776 (+) | 411 | WP_011680804.1 | peptide deformylase | - |
| J7T69_RS02325 (J7T69_02330) | rcrR | 426966..427409 (+) | 444 | WP_002945408.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| J7T69_RS02330 (J7T69_02335) | rcrP | 427413..429227 (+) | 1815 | WP_138496668.1 | ABC transporter ATP-binding protein | Regulator |
| J7T69_RS02335 (J7T69_02340) | rcrQ | 429217..430995 (+) | 1779 | WP_011225561.1 | ABC transporter ATP-binding protein | Regulator |
| J7T69_RS02340 (J7T69_02345) | - | 431151..431522 (+) | 372 | WP_232981380.1 | GNAT family acetyltransferase | - |
| J7T69_RS02345 (J7T69_02350) | - | 431545..432707 (+) | 1163 | Protein_401 | sensor histidine kinase | - |
| J7T69_RS02350 (J7T69_02355) | pyrH | 432943..433680 (+) | 738 | WP_002949867.1 | UMP kinase | - |
| J7T69_RS02355 (J7T69_02360) | frr | 433695..434252 (+) | 558 | WP_002949868.1 | ribosome recycling factor | - |
| J7T69_RS02360 (J7T69_02365) | cvfB | 434343..435200 (+) | 858 | WP_014608029.1 | RNA-binding virulence regulatory protein CvfB | - |
| J7T69_RS02365 (J7T69_02370) | - | 435209..435424 (+) | 216 | WP_002944188.1 | YozE family protein | - |
| J7T69_RS02370 (J7T69_02375) | - | 435665..436963 (+) | 1299 | WP_138496669.1 | LysM domain-containing protein | - |
| J7T69_RS02375 (J7T69_02380) | - | 437043..438104 (+) | 1062 | WP_138496670.1 | PhoH family protein | - |
| J7T69_RS02380 (J7T69_02385) | - | 438383..438541 (+) | 159 | WP_011680811.1 | hypothetical protein | - |
| J7T69_RS02385 (J7T69_02390) | - | 439313..439726 (+) | 414 | WP_014608035.1 | hypothetical protein | - |
| J7T69_RS02390 (J7T69_02395) | - | 440176..440412 (+) | 237 | WP_014608037.1 | hypothetical protein | - |
| J7T69_RS02395 (J7T69_02400) | - | 440409..440816 (+) | 408 | WP_002948125.1 | hypothetical protein | - |
| J7T69_RS02400 (J7T69_02405) | - | 440948..442204 (-) | 1257 | WP_011681055.1 | ISL3-like element ISSth1 family transposase | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 17031.41 Da Isoelectric Point: 9.5790
>NTDB_id=553092 J7T69_RS02325 WP_002945408.1 426966..427409(+) (rcrR) [Streptococcus thermophilus strain S24733]
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE
Nucleotide
Download Length: 444 bp
>NTDB_id=553092 J7T69_RS02325 WP_002945408.1 426966..427409(+) (rcrR) [Streptococcus thermophilus strain S24733]
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA
ATGCATGGAAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
56.028 |
95.918 |
0.537 |