Detailed information NTG0553094

Bioinformatically predicted

Overview

• Name: rcrQ
• Type: Regulator
• Locus tag: J7T69_RS02335
• Genome accession: NZ_CP072438
• Coordinates: 429217..430995 (+)
• Length: 592 a.a.
• NCBI ID: WP_011225561.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24733
• Function: regulate competence (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	420124..442276	429217..430995	within	0

Gene organization within MGE regions

Location: 420124..442276

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T69_RS02300 (J7T69_02300)	-	420124..421332 (+)	1209	WP_004197277.1	CCA tRNA nucleotidyltransferase	-
J7T69_RS02305 (J7T69_02305)	-	421410..423290 (+)	1881	WP_138496667.1	ABC-F family ATP-binding cassette domain-containing protein	-
J7T69_RS02310 (J7T69_02315)	-	423372..424412 (-)	1041	WP_339328283.1	AAA family ATPase	-
J7T69_RS02315 (J7T69_02320)	gdhA	424756..426108 (+)	1353	WP_011680803.1	NADP-specific glutamate dehydrogenase	-
J7T69_RS02320 (J7T69_02325)	-	426366..426776 (+)	411	WP_011680804.1	peptide deformylase	-
J7T69_RS02325 (J7T69_02330)	rcrR	426966..427409 (+)	444	WP_002945408.1	MarR family winged helix-turn-helix transcriptional regulator	Regulator
J7T69_RS02330 (J7T69_02335)	rcrP	427413..429227 (+)	1815	WP_138496668.1	ABC transporter ATP-binding protein	Regulator
J7T69_RS02335 (J7T69_02340)	rcrQ	429217..430995 (+)	1779	WP_011225561.1	ABC transporter ATP-binding protein	Regulator
J7T69_RS02340 (J7T69_02345)	-	431151..431522 (+)	372	WP_232981380.1	GNAT family acetyltransferase	-
J7T69_RS02345 (J7T69_02350)	-	431545..432707 (+)	1163	Protein_401	sensor histidine kinase	-
J7T69_RS02350 (J7T69_02355)	pyrH	432943..433680 (+)	738	WP_002949867.1	UMP kinase	-
J7T69_RS02355 (J7T69_02360)	frr	433695..434252 (+)	558	WP_002949868.1	ribosome recycling factor	-
J7T69_RS02360 (J7T69_02365)	cvfB	434343..435200 (+)	858	WP_014608029.1	RNA-binding virulence regulatory protein CvfB	-
J7T69_RS02365 (J7T69_02370)	-	435209..435424 (+)	216	WP_002944188.1	YozE family protein	-
J7T69_RS02370 (J7T69_02375)	-	435665..436963 (+)	1299	WP_138496669.1	LysM domain-containing protein	-
J7T69_RS02375 (J7T69_02380)	-	437043..438104 (+)	1062	WP_138496670.1	PhoH family protein	-
J7T69_RS02380 (J7T69_02385)	-	438383..438541 (+)	159	WP_011680811.1	hypothetical protein	-
J7T69_RS02385 (J7T69_02390)	-	439313..439726 (+)	414	WP_014608035.1	hypothetical protein	-
J7T69_RS02390 (J7T69_02395)	-	440176..440412 (+)	237	WP_014608037.1	hypothetical protein	-
J7T69_RS02395 (J7T69_02400)	-	440409..440816 (+)	408	WP_002948125.1	hypothetical protein	-
J7T69_RS02400 (J7T69_02405)	-	440948..442204 (-)	1257	WP_011681055.1	ISL3-like element ISSth1 family transposase	-

Sequence

Protein

• Length: 592 a.a.
• Molecular weight: 65120.17 Da
• Isoelectric Point: 5.0166

>NTDB_id=553094 J7T69_RS02335 WP_011225561.1 429217..430995(+) (rcrQ) [Streptococcus thermophilus strain S24733]
MENKPKTSSYKRLKPYIKGFQVPFVLAIVGAIISAVITVIGPDKLKEITNLITDGITPTKMGVIPGIDLDKVGSIALTLA
VLYAISAIVGYLQSFTVVTITQRFSQRFRTAIQKKINTVPLNYFDSHSQGDILSRVTNDVDLLGQSLSQGLGTLITSSIL
LVAAIIMMFYSNVTMAFTAIGSVLIGFVLVAFIMGFSQPLFKRQQENLANINGYIEEIYTGQAVVTSYNASKESSQDFKG
LNDKLYNSMWQSQFISGIMMPLMIFIGNFGYVMVCLVGAVKVIDGSLTIGDVVAFMTYVRIFSQPLSQIAQGITQLQSAT
AAIGSIFEFLEEKDMDDESVKTAELTDTKGQVVFDHVSFGYTPEKTIIHDFSALAKPGQKIAIVGPTGAGKTTIVNLLMK
FYNIDKGRITIDGVDTNDMKRETVHDQFSMVLQDTWLFEGTIRDNLIYNQENISDEQVIATAKAVGVHHFITTLPKGYDT
YLDDSVTLSVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMKD
GNIIEQGNHDELMAANGFYADLYNSQFTEEVA

Nucleotide

• Length: 1779 bp

>NTDB_id=553094 J7T69_RS02335 WP_011225561.1 429217..430995(+) (rcrQ) [Streptococcus thermophilus strain S24733]
ATGGAAAATAAGCCAAAAACATCGTCCTATAAACGTTTAAAACCCTATATTAAAGGTTTCCAAGTTCCCTTTGTCCTTGC
GATTGTTGGAGCCATTATTTCAGCAGTTATAACTGTTATTGGACCTGATAAATTAAAAGAAATCACCAATCTTATTACAG
ATGGGATTACGCCAACTAAGATGGGGGTTATTCCGGGCATCGATTTAGACAAGGTGGGCAGCATTGCTTTAACCTTGGCT
GTTTTATATGCCATTTCAGCCATTGTTGGTTACTTACAAAGTTTTACCGTTGTAACAATTACGCAACGATTTTCACAACG
TTTCCGTACAGCAATCCAAAAGAAAATCAACACCGTACCTCTTAATTATTTTGATAGTCATTCTCAAGGAGACATACTCT
CTCGTGTGACTAATGACGTTGACCTTTTGGGACAATCGCTTAGTCAGGGTCTGGGTACTCTAATTACTTCAAGCATTCTC
TTGGTAGCAGCCATTATTATGATGTTCTACTCAAATGTTACTATGGCTTTCACTGCGATTGGTTCTGTCTTGATAGGATT
TGTTCTAGTAGCCTTTATCATGGGCTTCTCGCAACCACTTTTTAAACGCCAACAAGAAAATTTGGCTAACATTAATGGGT
ACATTGAAGAAATCTACACAGGTCAAGCAGTTGTAACGAGCTACAATGCATCTAAAGAAAGCAGTCAAGATTTCAAGGGG
CTTAATGATAAGCTCTATAATTCAATGTGGCAATCTCAGTTTATTTCTGGTATTATGATGCCACTTATGATTTTCATCGG
TAACTTTGGTTACGTCATGGTCTGCTTGGTAGGTGCTGTTAAGGTAATTGACGGAAGCCTGACCATCGGTGATGTGGTAG
CCTTCATGACCTATGTTCGTATCTTTTCACAACCTCTTTCTCAAATTGCACAAGGGATTACACAACTCCAATCAGCAACT
GCAGCTATTGGTAGTATCTTTGAATTTTTGGAAGAAAAAGATATGGACGACGAGTCAGTCAAGACAGCTGAGTTGACAGA
TACCAAGGGTCAAGTAGTCTTTGACCATGTTTCCTTTGGTTATACTCCTGAAAAGACTATCATTCATGATTTTTCAGCTC
TTGCCAAGCCAGGACAAAAGATTGCTATTGTTGGTCCGACGGGTGCTGGTAAGACAACCATTGTTAACCTGCTTATGAAA
TTCTATAATATCGATAAAGGCCGTATCACCATTGACGGTGTGGATACGAACGACATGAAGCGTGAGACCGTCCATGATCA
ATTTTCTATGGTACTTCAAGACACTTGGCTCTTTGAAGGAACGATTCGAGATAACTTGATTTACAACCAAGAAAATATCT
CTGACGAGCAAGTTATTGCTACAGCCAAGGCCGTGGGTGTTCATCACTTCATCACCACACTTCCAAAAGGTTACGATACC
TATTTGGATGATTCTGTTACTTTATCAGTTGGTCAGAAACAACTTTTGACCATTGCGCGTGCACTTCTTAAGGATGCCCC
TCTTCTTATCTTGGACGAGGCAACATCATCAGTTGACACACGAACAGAAGAATTGATTCAGAAGGCTATGGACAAGCTTA
TGGAGGGTCGTACATCCTTTGTCATTGCCCACCGCTTATCAACCATTCGAAATGCGGACCTCATCCTTGTGATGAAAGAT
GGTAACATTATTGAACAGGGAAATCATGATGAGCTCATGGCAGCAAATGGATTCTATGCTGATCTTTATAATAGTCAGTT
TACGGAAGAAGTGGCCTAG

Domains

Predicted by InterproScan.

• ABC transporter transmembrane region (ABC_membrane) (25-306)

• ABC transporter (ABC_tran) (371-516)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rcrQ	Streptococcus mutans UA159	68.919	100	0.689