Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   J7U23_RS09805 Genome accession   NZ_CP072435
Coordinates   1894937..1895704 (+) Length   255 a.a.
NCBI ID   WP_180477211.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24736     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1889937..1900704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS09790 (J7U23_09715) - 1892253..1892936 (-) 684 WP_164178359.1 YoaK family protein -
  J7U23_RS09795 (J7U23_09720) rlmH 1892952..1893431 (-) 480 WP_002952297.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  J7U23_RS09800 (J7U23_09725) htrA 1893636..1894871 (+) 1236 WP_372589919.1 S1C family serine protease Regulator
  J7U23_RS09805 (J7U23_09730) spo0J 1894937..1895704 (+) 768 WP_180477211.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29421.77 Da        Isoelectric Point: 9.7117

>NTDB_id=552955 J7U23_RS09805 WP_180477211.1 1894937..1895704(+) (spo0J) [Streptococcus thermophilus strain S24736]
MSEQLKTLSISEIHPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=552955 J7U23_RS09805 WP_180477211.1 1894937..1895704(+) (spo0J) [Streptococcus thermophilus strain S24736]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTCACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCCATAACTCTACGTTATCACAAAAATCACTCAGGAACTATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569