Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   J7U23_RS05670 Genome accession   NZ_CP072435
Coordinates   1086264..1087076 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain S24736     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081264..1092076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U23_RS05645 (J7U23_05605) - 1082201..1082587 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  J7U23_RS05650 (J7U23_05610) - 1082679..1083558 (-) 880 Protein_1058 GNAT family N-acetyltransferase -
  J7U23_RS05655 (J7U23_05615) yidA 1083766..1084575 (+) 810 WP_011226081.1 sugar-phosphatase -
  J7U23_RS05660 (J7U23_05620) - 1084577..1085791 (+) 1215 WP_011227270.1 aminoacyltransferase -
  J7U23_RS05665 (J7U23_05625) - 1085843..1086204 (-) 362 Protein_1061 YbaN family protein -
  J7U23_RS05670 (J7U23_05630) vicX 1086264..1087076 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  J7U23_RS05675 (J7U23_05635) vicK 1087082..1088422 (-) 1341 WP_011226083.1 cell wall metabolism sensor histidine kinase VicK Regulator
  J7U23_RS05680 (J7U23_05640) vicR 1088415..1089122 (-) 708 WP_372589830.1 response regulator YycF Regulator
  J7U23_RS05685 (J7U23_05645) - 1089649..1090416 (+) 768 WP_011227275.1 amino acid ABC transporter ATP-binding protein -
  J7U23_RS05690 (J7U23_05650) - 1090428..1091261 (+) 834 WP_179970874.1 transporter substrate-binding domain-containing protein -
  J7U23_RS05695 (J7U23_05655) - 1091279..1091977 (+) 699 WP_065973256.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=552925 J7U23_RS05670 WP_011681204.1 1086264..1087076(-) (vicX) [Streptococcus thermophilus strain S24736]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=552925 J7U23_RS05670 WP_011681204.1 1086264..1087076(-) (vicX) [Streptococcus thermophilus strain S24736]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774