Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   J4854_RS01555 Genome accession   NZ_CP072329
Coordinates   272577..273836 (+) Length   419 a.a.
NCBI ID   WP_200772929.1    Uniprot ID   -
Organism   Streptococcus lactarius strain CCUG 66490     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 267577..278836
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4854_RS01530 (J4854_01530) - 267598..269691 (+) 2094 WP_200772927.1 AAA family ATPase -
  J4854_RS01535 (J4854_01535) - 269951..270196 (+) 246 WP_187539850.1 hypothetical protein -
  J4854_RS01540 (J4854_01540) yajC 270353..270667 (+) 315 WP_200772928.1 preprotein translocase subunit YajC -
  J4854_RS01545 (J4854_01545) - 270978..271727 (+) 750 WP_187539854.1 isoprenyl transferase -
  J4854_RS01550 (J4854_01550) - 271737..272540 (+) 804 WP_187539856.1 phosphatidate cytidylyltransferase -
  J4854_RS01555 (J4854_01555) eeP 272577..273836 (+) 1260 WP_200772929.1 RIP metalloprotease RseP Regulator
  J4854_RS01560 (J4854_01560) - 273852..275702 (+) 1851 WP_200772930.1 proline--tRNA ligase -
  J4854_RS01565 (J4854_01565) - 275756..276307 (-) 552 WP_200772931.1 hypothetical protein -
  J4854_RS01570 (J4854_01570) - 276784..277071 (+) 288 WP_049474440.1 WXG100 family type VII secretion target -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 46032.55 Da        Isoelectric Point: 6.6619

>NTDB_id=552026 J4854_RS01555 WP_200772929.1 272577..273836(+) (eeP) [Streptococcus lactarius strain CCUG 66490]
MQFIAFIVIFGVIVLVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGQDGTAYTIRILPLGGYVRMAGWGEDTTEIKTG
TPVSLTLNEAGKVVRINLSGKNLDQTALPMNVTQFDFEDKLEITGLVLDETKTYDVDHDATIVEEDGTEVRIAPRDVQYQ
NASIWGRLITNFAGPMNNFILSIIVYSLLAFMRGGAIDYYSNNVQVTPDGALAKVGVKSNVQILQVNNDTVSNWDELTDA
VEKATKDSKTAPELTLKVKTDGKEKEVKVKPTKSGDRYYLGVTNGIKTGFMDKLLSGFTDTWNTATRILGALKDIIFHFS
LNKLGGPVAIYNASSQAAQLGIPAVLSLMAMLSINIGIFNLIPIPALDGGKILINLIEVVRRKPLKQEVETYMTLAGVAL
MVILMIAVTWNDIMKLFLK

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=552026 J4854_RS01555 WP_200772929.1 272577..273836(+) (eeP) [Streptococcus lactarius strain CCUG 66490]
ATGCAATTTATTGCTTTTATTGTTATTTTTGGAGTGATCGTACTTGTCCATGAGTTTGGTCATTTCTATTTTGCGAAAAA
ATCGGGCATCCTGGTGCGAGAATTCTCAATCGGGATGGGACCCAAGATCTTTGCCCATATTGGTCAGGACGGGACAGCCT
ATACCATTCGGATCCTACCTTTAGGTGGCTACGTTCGGATGGCTGGCTGGGGGGAGGACACGACGGAGATTAAGACTGGT
ACTCCCGTCAGCTTGACACTCAATGAGGCTGGTAAGGTCGTCCGGATCAATCTTTCTGGAAAGAATCTGGATCAGACAGC
CCTTCCTATGAATGTTACCCAGTTTGACTTTGAAGATAAATTAGAAATCACGGGCTTGGTTCTCGATGAGACAAAGACCT
ATGATGTCGATCATGATGCAACCATCGTTGAGGAAGATGGGACCGAAGTGCGGATTGCACCGAGAGATGTTCAGTATCAG
AATGCCAGCATTTGGGGACGATTAATCACCAACTTTGCGGGTCCTATGAACAACTTTATCCTCAGTATTATTGTCTACTC
ACTCTTAGCCTTTATGCGCGGTGGTGCGATTGACTATTACAGCAACAATGTTCAGGTAACACCTGATGGTGCGCTGGCTA
AGGTTGGTGTCAAAAGCAATGTTCAGATCCTTCAGGTAAACAACGATACCGTGAGCAACTGGGATGAATTGACAGATGCT
GTGGAAAAGGCGACCAAGGACAGCAAGACTGCTCCGGAGTTAACCTTGAAAGTCAAGACAGATGGCAAAGAAAAAGAAGT
CAAAGTGAAACCAACCAAATCAGGAGATCGTTACTATCTGGGTGTGACAAACGGGATCAAGACAGGCTTTATGGATAAGC
TCTTGTCTGGTTTTACAGATACCTGGAATACAGCGACTCGGATTTTGGGAGCTTTGAAAGATATCATTTTCCACTTTAGT
CTCAATAAACTGGGTGGTCCAGTTGCCATCTACAATGCCAGCTCACAAGCAGCTCAACTAGGAATTCCTGCTGTGTTATC
CCTCATGGCCATGCTCTCGATCAATATTGGAATTTTCAATCTGATCCCGATTCCAGCCTTGGATGGTGGAAAAATCTTGA
TCAACCTGATCGAAGTGGTCCGTAGAAAACCGCTCAAGCAAGAAGTAGAAACCTATATGACGCTCGCAGGTGTAGCTCTG
ATGGTGATCTTGATGATTGCTGTCACCTGGAACGATATTATGAAATTATTTTTGAAATAG

Domains


Predicted by InterproScan.

(5-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.144

99.284

0.647

  eeP Streptococcus thermophilus LMD-9

64.904

99.284

0.644