Detailed information NTG0551926

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J6B42_RS17080
• Genome accession: NZ_CP072311
• Coordinates: 3434702..3435865 (-)
• Length: 387 a.a.
• NCBI ID: WP_248872589.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SC60
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3429702..3440865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6B42_RS17050 (J6B42_16990)	-	3429967..3430386 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
J6B42_RS17055 (J6B42_16995)	comFC	3430460..3431149 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
J6B42_RS17060 (J6B42_17000)	-	3431155..3431439 (-)	285	WP_003151389.1	competence protein ComFB	-
J6B42_RS17065 (J6B42_17005)	comFA	3431497..3432882 (-)	1386	WP_025853539.1	DEAD/DEAH box helicase	Machinery gene
J6B42_RS17070 (J6B42_17010)	-	3432990..3433838 (-)	849	WP_003151387.1	DegV family protein	-
J6B42_RS17075 (J6B42_17015)	degU	3433936..3434625 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
J6B42_RS17080 (J6B42_17020)	degS	3434702..3435865 (-)	1164	WP_248872589.1	two-component sensor histidine kinase DegS	Regulator
J6B42_RS17085 (J6B42_17025)	-	3436088..3436735 (+)	648	WP_003151384.1	YigZ family protein	-
J6B42_RS17090 (J6B42_17030)	-	3436740..3437954 (+)	1215	WP_003151383.1	LCP family protein	-
J6B42_RS17095 (J6B42_17035)	-	3438044..3439120 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
J6B42_RS17100 (J6B42_17040)	-	3439253..3440449 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45143.99 Da
• Isoelectric Point: 7.1378

>NTDB_id=551926 J6B42_RS17080 WP_248872589.1 3434702..3435865(-) (degS) [Bacillus velezensis strain SC60]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLWLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=551926 J6B42_RS17080 WP_248872589.1 3434702..3435865(-) (degS) [Bacillus velezensis strain SC60]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGTGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.065	99.483	0.946