Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   J6B42_RS15155 Genome accession   NZ_CP072311
Coordinates   3058027..3060327 (-) Length   766 a.a.
NCBI ID   WP_226565991.1    Uniprot ID   -
Organism   Bacillus velezensis strain SC60     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3053027..3065327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J6B42_RS15115 (J6B42_15045) - 3053487..3053918 (+) 432 WP_025853921.1 Na(+)/H(+) antiporter subunit B -
  J6B42_RS15120 (J6B42_15050) - 3053918..3054259 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  J6B42_RS15125 (J6B42_15055) - 3054252..3055733 (+) 1482 WP_025853920.1 Na+/H+ antiporter subunit D -
  J6B42_RS15130 (J6B42_15060) - 3055739..3056215 (+) 477 WP_025853919.1 Na+/H+ antiporter subunit E -
  J6B42_RS15135 (J6B42_15065) - 3056215..3056499 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  J6B42_RS15140 (J6B42_15070) mnhG 3056483..3056857 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  J6B42_RS15145 (J6B42_15075) - 3056897..3057280 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  J6B42_RS15150 (J6B42_15080) comA 3057302..3057946 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  J6B42_RS15155 (J6B42_15085) comP 3058027..3060327 (-) 2301 WP_226565991.1 histidine kinase Regulator
  J6B42_RS15160 (J6B42_15090) comX 3060341..3060514 (-) 174 WP_102422026.1 competence pheromone ComX -
  J6B42_RS15165 (J6B42_15095) - 3060483..3061343 (-) 861 WP_180997900.1 polyprenyl synthetase family protein -
  J6B42_RS15170 (J6B42_15100) degQ 3061551..3061691 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  J6B42_RS15175 (J6B42_15105) - 3062157..3062498 (+) 342 WP_014305721.1 hypothetical protein -
  J6B42_RS15180 (J6B42_15110) - 3062505..3063725 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  J6B42_RS15185 (J6B42_15115) - 3063855..3065321 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88270.53 Da        Isoelectric Point: 7.1698

>NTDB_id=551919 J6B42_RS15155 WP_226565991.1 3058027..3060327(-) (comP) [Bacillus velezensis strain SC60]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=551919 J6B42_RS15155 WP_226565991.1 3058027..3060327(-) (comP) [Bacillus velezensis strain SC60]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACTTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.527

100

0.565