Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | LUA14_RS08050 | Genome accession | NZ_CP089530 |
| Coordinates | 1556561..1557583 (+) | Length | 340 a.a. |
| NCBI ID | WP_007409697.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain LS1-002-014s | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1551561..1562583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LUA14_RS08010 (LUA14_08010) | - | 1551920..1552159 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| LUA14_RS08015 (LUA14_08015) | ylbF | 1552230..1552679 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| LUA14_RS08020 (LUA14_08020) | - | 1552738..1553010 (+) | 273 | WP_003154470.1 | YlbG family protein | - |
| LUA14_RS08025 (LUA14_08025) | - | 1553101..1553310 (+) | 210 | WP_007409692.1 | hypothetical protein | - |
| LUA14_RS08030 (LUA14_08030) | rsmD | 1553310..1553864 (+) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| LUA14_RS08035 (LUA14_08035) | coaD | 1553869..1554351 (+) | 483 | WP_007409694.1 | pantetheine-phosphate adenylyltransferase | - |
| LUA14_RS08040 (LUA14_08040) | ylbJ | 1554370..1555596 (-) | 1227 | WP_094031688.1 | sporulation integral membrane protein YlbJ | - |
| LUA14_RS08045 (LUA14_08045) | - | 1555776..1556555 (+) | 780 | WP_218791623.1 | patatin family protein | - |
| LUA14_RS08050 (LUA14_08050) | sepM | 1556561..1557583 (+) | 1023 | WP_007409697.1 | SepM family pheromone-processing serine protease | Regulator |
| LUA14_RS08055 (LUA14_08055) | - | 1557603..1558850 (-) | 1248 | WP_052827397.1 | nucleotidyltransferase | - |
| LUA14_RS08060 (LUA14_08060) | - | 1559059..1559577 (+) | 519 | WP_012117495.1 | YceD family protein | - |
| LUA14_RS08065 (LUA14_08065) | rpmF | 1559599..1559778 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| LUA14_RS08070 (LUA14_08070) | gerR | 1559940..1560515 (+) | 576 | WP_012117496.1 | sporulation-specific transcriptional regulator GerR | - |
| LUA14_RS08075 (LUA14_08075) | - | 1560555..1561037 (-) | 483 | WP_007409700.1 | N-acetyltransferase | - |
| LUA14_RS08080 (LUA14_08080) | - | 1561200..1562081 (+) | 882 | WP_015239812.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37448.99 Da Isoelectric Point: 7.3837
>NTDB_id=551853 LUA14_RS08050 WP_007409697.1 1556561..1557583(+) (sepM) [Bacillus amyloliquefaciens strain LS1-002-014s]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYEEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIYASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPDDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=551853 LUA14_RS08050 WP_007409697.1 1556561..1557583(+) (sepM) [Bacillus amyloliquefaciens strain LS1-002-014s]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCTCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATCGCTGTTACATTTATTAAGCTTCCGTATTA
CATCACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGAAGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGCATTTATGCCAGTTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAAAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGACGACCCGAAAAGAGCGGGAATCGGTGTCGCATTATATACGGACC
GGAACGTGAAAGTGAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAACCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGGACAATCGACGTGGACGG
CAAAGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCTCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.953 |
100 |
0.394 |