Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ANG_RS07965 Genome accession   NZ_AP013072
Coordinates   1584083..1585885 (-) Length   600 a.a.
NCBI ID   WP_025271893.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1579083..1590885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS07950 (ANG_1616) - 1581646..1582215 (-) 570 WP_080553209.1 LURP-one-related/scramblase family protein -
  ANG_RS07955 (ANG_1617) prsA 1582353..1583291 (-) 939 WP_025271892.1 peptidylprolyl isomerase PrsA -
  ANG_RS07960 (ANG_1618) - 1583398..1584081 (-) 684 WP_003037234.1 O-methyltransferase -
  ANG_RS07965 (ANG_1619) pepF 1584083..1585885 (-) 1803 WP_025271893.1 oligoendopeptidase F Regulator
  ANG_RS07970 (ANG_1620) coiA 1585837..1586868 (-) 1032 WP_038677310.1 competence protein CoiA Machinery gene
  ANG_RS07975 (ANG_1621) celB 1587191..1588534 (-) 1344 WP_038677312.1 PTS cellobiose transporter subunit IIC -
  ANG_RS07980 (ANG_1622) - 1588574..1589080 (-) 507 WP_025271895.1 hypothetical protein -
  ANG_RS07985 (ANG_1623) - 1589103..1589420 (-) 318 WP_025271896.1 PTS cellobiose transporter subunit IIA -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69198.19 Da        Isoelectric Point: 4.6140

>NTDB_id=55126 ANG_RS07965 WP_025271893.1 1584083..1585885(-) (pepF) [Streptococcus anginosus subsp. whileyi MAS624]
MAKQRNEIEEKYTWDLTTIFPTDEAFEAELSQVSKELKEASSLAGHLLDSADSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQTFAFYEPEFMAITDEQYQTFLAEKPELKIYQHFFDKLLQKKTHILSQREEELLAGA
GEIFSAAGDTFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALT
KAEEVLAILGDDYLSRVKKAFSERWIDVHENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLG

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=55126 ANG_RS07965 WP_025271893.1 1584083..1585885(-) (pepF) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCCCAACAGATGAAGCTTTTGA
GGCAGAGTTAAGTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCAGGTCATCTTTTGGATTCGGCTGATAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTAATGCGTCGCATAGAAAAGCTCTATTCCTATGCTCACATGAAAAATGAT
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCCAAAGGAATGGCCATTTATAGCGAGTTCGGACAAACTTTTGC
TTTCTATGAACCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGAAAATCT
ATCAACACTTCTTTGATAAGCTGCTGCAAAAGAAAACTCACATTCTTTCTCAACGTGAGGAAGAATTGTTAGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGATACTTTTGGAATCTTAGACAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAG
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACACACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCCTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTAAACAAACATTTGCCACTCTTACATCGCTATATTGCGCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTACGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACCTATGAAGAAGCTTTGACA
AAAGCAGAAGAAGTTTTAGCGATTCTCGGAGATGATTATCTTAGTCGAGTGAAAAAGGCCTTTTCAGAGCGCTGGATTGA
TGTTCATGAGAATCAAGGCAAACGCTCAGGAGCTTATTCTGGCGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACACTGGTTCATGAAACGGGGCACAGCATGCATTCCAGCTATACTCGTGAAACA
CAGCCGTACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTAACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTAGATGGCTTCCGTGGGACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAATCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTATTATGTATTCCAATATTCTACTGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTCAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTG
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTACCTCAATGCTGCCTTTGCAGTTTTTGAACGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGACTGGGATAA

Domains

Predicted by InterProScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

69.295

99.333

0.688

Multiple sequence alignment