Detailed information    

insolico Bioinformatically predicted

Overview

Name   rexB   Type   Machinery gene
Locus tag   ANG_RS07755 Genome accession   NZ_AP013072
Coordinates   1529813..1533085 (-) Length   1090 a.a.
NCBI ID   WP_025271882.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1524813..1538085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS07750 (ANG_1573) rexA 1526136..1529816 (-) 3681 WP_025271881.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  ANG_RS07755 (ANG_1574) rexB 1529813..1533085 (-) 3273 WP_025271882.1 ATP-dependent nuclease subunit B Machinery gene
  ANG_RS07760 (ANG_1575) - 1533206..1534420 (-) 1215 WP_025271883.1 ABC transporter permease -
  ANG_RS07765 (ANG_1576) - 1534417..1535310 (-) 894 WP_003037226.1 ABC transporter ATP-binding protein -
  ANG_RS07770 (ANG_1577) - 1535506..1535718 (-) 213 WP_003037473.1 YdbC family protein -
  ANG_RS07775 (ANG_1578) - 1535806..1536147 (+) 342 WP_025271884.1 hypothetical protein -
  ANG_RS07780 (ANG_1579) - 1536163..1536921 (-) 759 WP_003037298.1 ABC transporter ATP-binding protein -
  ANG_RS07785 (ANG_1580) - 1536918..1537784 (-) 867 WP_003037452.1 ABC transporter permease -

Sequence

Protein


Download         Length: 1090 a.a.        Molecular weight: 125497.61 Da        Isoelectric Point: 5.0325

>NTDB_id=55123 ANG_RS07755 WP_025271882.1 1529813..1533085(-) (rexB) [Streptococcus anginosus subsp. whileyi MAS624]
MKLLYTDIRNPLTKILVKEAERLAQAGKRVFYIAPNSLSFEKERAVLSLLENHASFAITVTRFAQMARYFVLNDVQQGKP
LDDIGLGMLFYKVLSEMEEHDLQVYGGIRTDAQFIQQLVELYHELQEAKMTVADLDSLDEAEKKADLIKIFQVVMYQLNQ
SEFTSDSNIMAFTHHIIVGDVDEELQDLVLVIDGFTRFSAEEAYLIELLHNKGVEIIIGVYASEKAYRATFREGNLYQAS
VDFLRHLANEYEVKPEYRPAAQPDDAFGNISKLLESRYDFSDVELELTEQDRSHVQIWSTVNQKEELEYVAKSIRQRVHD
GARYKDIRLLLGDVEAYRLQLKTIFDQYQIPFYLGRNEAMAHHPLVQFIEALVRLKHYNFRTEDLLNLLKTGLYGHLKQE
ELDLFEQYIRFADVKGASKFAKDFTHNQRHKFDLVQINRLRKKIVSPLLEFFKSRSQTATGLLQKFHQFLTVIAFSQNFA
GLVDFTNPQDQERQEEVWKAFCHVLEQFASVFSASKVKLDDFLTLVQSGMLLSNYRTIPATVDVVTVQSYDLIEPLSSPF
VYAVGLTQDYFPKIVQNKSLLSDEERLRLNEATDEHSELLIAAQENLKKNRFVALSLLNAATDRLVLSTPQIVNEIENDI
SPYLLELREQPIALPIEVKHPQATSDDIGTYRALLARVIELNQGDIDKEHSLTEKEQTFWSVAVRVLRKKLESEGISIPN
VTSSLETETLSEQTLQILYPPHQAFLLSTSALTEFYRNQYAYFLKYILALQEEMTIYPDARSHGNFLHRVFEKVVHDQSN
EQFDIRLEKVIQEVSCEPEFEALYTESAEALFAHEVLLDAARATGQVLERNELVETIQEEAVFGQEETNVLILSDGRNLQ
IRGKVDRIDRLRIDGSLGVVDYKSSDTNFDFQKFFNGLNSQLPTYLAALKQESWMNEEEHAFGAMYLQMTNPLVSLAKTK
SQGDAIKEAMKNLEYKGLFLSEQARQLNALYDKKKVNLLSQEELETLLAYNALLYRRAAEQILAGHFYINPYTENGKSIA
PFVEQYKSITGFEANLHLSSARRLVKLDSHPTGEKKRQAWIEKMKEELEK

Nucleotide


Download         Length: 3273 bp        

>NTDB_id=55123 ANG_RS07755 WP_025271882.1 1529813..1533085(-) (rexB) [Streptococcus anginosus subsp. whileyi MAS624]
ATGAAATTACTTTATACTGATATTCGCAATCCCTTAACGAAGATTTTGGTGAAAGAAGCAGAGCGCTTGGCACAAGCAGG
CAAGCGCGTGTTTTATATTGCCCCCAACTCTCTTTCATTTGAAAAAGAGAGGGCTGTTTTGAGTCTTTTAGAAAACCACG
CTTCGTTTGCTATTACAGTGACACGTTTTGCGCAGATGGCGCGTTATTTTGTCCTCAATGATGTGCAGCAAGGCAAACCA
TTAGATGATATTGGTTTGGGAATGCTCTTTTACAAGGTCTTATCTGAAATGGAAGAGCATGATTTGCAGGTGTACGGTGG
CATTCGGACGGATGCGCAGTTTATTCAGCAATTGGTTGAACTCTATCATGAGTTGCAAGAAGCCAAAATGACTGTTGCAG
ACTTGGACTCTCTGGATGAAGCCGAGAAAAAAGCAGATTTAATCAAGATTTTTCAAGTAGTGATGTATCAGCTTAATCAG
AGTGAATTTACTTCTGATTCAAATATCATGGCCTTTACCCATCATATTATAGTAGGTGATGTGGATGAGGAACTGCAGGA
TTTAGTCTTGGTTATTGATGGCTTTACGCGCTTTTCGGCTGAGGAAGCTTATTTGATCGAGCTTTTGCATAATAAGGGTG
TGGAAATCATTATTGGTGTTTATGCCAGTGAGAAGGCATACCGTGCGACTTTTCGAGAGGGCAATCTCTATCAGGCTAGC
GTGGATTTCTTGCGCCATTTGGCAAATGAGTATGAAGTGAAACCTGAATATAGACCTGCAGCGCAGCCGGATGATGCTTT
TGGGAACATTTCAAAACTGCTAGAAAGCCGTTATGATTTCTCAGATGTTGAGTTGGAATTGACGGAACAGGATCGCTCGC
ATGTACAGATTTGGTCGACTGTCAATCAAAAGGAAGAACTGGAATATGTGGCAAAAAGCATTCGCCAGCGAGTTCATGAT
GGTGCTCGCTACAAAGATATTCGCTTACTTTTGGGAGATGTGGAAGCCTATCGTTTGCAGTTAAAGACGATTTTTGATCA
GTATCAAATCCCTTTTTATCTGGGACGAAATGAGGCTATGGCCCATCACCCTTTGGTGCAATTTATTGAAGCTTTAGTGC
GCCTAAAACACTACAATTTTCGAACGGAAGATTTGCTCAATCTCTTAAAAACAGGTCTTTATGGTCATTTAAAGCAAGAA
GAGTTAGACTTGTTTGAGCAATATATTCGTTTTGCAGATGTAAAAGGAGCCAGCAAATTTGCCAAGGATTTCACTCACAA
TCAACGTCATAAGTTTGATTTAGTTCAAATCAATCGTTTGAGGAAGAAGATAGTGTCTCCTTTGTTAGAGTTTTTCAAAT
CTCGCAGTCAAACAGCGACAGGTCTGCTCCAGAAATTTCATCAATTTTTGACAGTGATTGCTTTTTCTCAGAATTTTGCT
GGTTTAGTAGATTTTACGAATCCGCAAGATCAAGAACGGCAAGAAGAAGTTTGGAAAGCTTTTTGTCATGTTTTGGAACA
ATTTGCCAGTGTCTTTTCAGCCAGCAAGGTCAAGCTAGATGATTTTCTGACTCTGGTGCAGTCAGGAATGCTGTTATCCA
ATTATCGGACTATTCCAGCAACGGTGGACGTTGTGACCGTTCAATCTTATGATTTGATTGAGCCCTTGTCAAGTCCTTTT
GTCTATGCTGTTGGTTTGACCCAAGACTATTTTCCAAAAATTGTGCAAAACAAGAGTCTCTTGTCAGATGAAGAACGATT
ACGATTAAATGAAGCGACTGATGAGCATTCGGAATTGCTGATTGCTGCTCAGGAAAATCTCAAGAAAAATCGTTTTGTCG
CCTTGTCACTTCTAAATGCTGCAACGGATAGATTGGTACTTTCCACTCCTCAGATTGTCAATGAAATAGAGAATGACATT
TCTCCATATCTGTTGGAACTGCGTGAGCAACCAATTGCTTTGCCAATTGAGGTGAAGCATCCGCAGGCAACAAGTGATGA
TATTGGTACTTATCGTGCTTTATTGGCGAGGGTTATTGAGTTGAATCAAGGAGATATTGATAAAGAGCATTCTTTGACTG
AGAAAGAACAGACTTTTTGGTCAGTAGCTGTACGAGTTTTACGCAAAAAATTGGAAAGTGAAGGCATTTCGATTCCGAAT
GTCACGTCAAGTCTTGAGACAGAAACCTTGTCAGAACAGACTTTGCAAATCCTTTATCCGCCTCATCAAGCATTTCTATT
GTCGACTTCAGCTTTGACAGAATTTTATCGTAATCAGTATGCTTATTTTTTGAAGTATATTTTGGCTCTGCAAGAAGAAA
TGACAATTTACCCAGATGCGCGCAGTCATGGAAATTTTCTGCACCGTGTGTTTGAAAAAGTCGTGCACGATCAATCGAAC
GAGCAATTCGACATCCGTCTAGAAAAAGTCATTCAGGAAGTAAGCTGTGAACCTGAGTTTGAAGCTCTTTATACCGAAAG
TGCCGAAGCATTGTTTGCTCATGAAGTTTTGCTTGACGCAGCGCGTGCGACAGGACAGGTTTTAGAGAGAAATGAATTGG
TAGAAACCATTCAAGAAGAAGCTGTTTTCGGTCAAGAAGAAACAAATGTTCTAATCTTGTCAGACGGACGCAACCTTCAA
ATTCGAGGGAAAGTTGACCGGATTGACCGTTTGAGGATAGATGGCAGTCTAGGCGTTGTTGACTATAAATCAAGCGATAC
GAATTTTGATTTTCAGAAATTTTTCAATGGCTTAAATTCTCAATTACCTACCTATCTAGCAGCTTTGAAACAAGAGTCGT
GGATGAATGAAGAAGAGCATGCTTTTGGCGCCATGTATTTGCAGATGACCAATCCACTTGTGTCTTTAGCCAAGACGAAA
TCGCAAGGCGACGCTATCAAAGAAGCAATGAAGAACCTAGAATACAAAGGTCTGTTCTTGTCTGAGCAGGCTCGTCAGCT
GAATGCTTTGTACGATAAAAAGAAAGTGAATCTGTTGAGTCAAGAGGAGTTGGAGACATTGTTGGCTTATAATGCACTCT
TGTATCGCCGTGCTGCTGAGCAGATTTTGGCAGGGCATTTTTACATCAATCCTTATACGGAGAATGGCAAAAGTATTGCA
CCTTTTGTGGAGCAGTACAAGTCCATTACGGGATTTGAAGCGAACCTTCACCTCTCTAGCGCTCGCCGTTTGGTTAAGTT
AGATAGCCACCCGACAGGTGAAAAAAAACGTCAAGCATGGATAGAAAAGATGAAGGAGGAGTTAGAAAAATGA

Domains

Predicted by InterProScan.

PD-(D/E)XK nuclease superfamily (PDDEXK_1)

(747-1033)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rexB Streptococcus pneumoniae R6

55.163

100

0.559

Multiple sequence alignment