Detailed information NTG0551028

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J6M00_RS08500
• Genome accession: NZ_CP072188
• Coordinates: 1743797..1744900 (+)
• Length: 367 a.a.
• NCBI ID: WP_049334427.1
• Uniprot ID: A0AAP3EVI0
• Organism: Riemerella anatipestifer strain 20190121E1-3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1738797..1749900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J6M00_RS08480 (J6M00_08475)	-	1741136..1741609 (+)	474	WP_153926386.1	Lrp/AsnC family transcriptional regulator	-
J6M00_RS08485 (J6M00_08480)	-	1741638..1742828 (+)	1191	WP_153929505.1	carboxypeptidase-like regulatory domain-containing protein	-
J6M00_RS08490 (J6M00_08485)	ruvC	1742852..1743406 (+)	555	WP_064971300.1	crossover junction endodeoxyribonuclease RuvC	-
J6M00_RS08495 (J6M00_08490)	-	1743417..1743794 (+)	378	WP_049334428.1	group III truncated hemoglobin	-
J6M00_RS08500 (J6M00_08495)	dprA	1743797..1744900 (+)	1104	WP_049334427.1	DNA-processing protein DprA	Machinery gene
J6M00_RS08505 (J6M00_08500)	gdhA	1745084..1746442 (+)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
J6M00_RS08510 (J6M00_08505)	-	1746571..1747221 (+)	651	WP_153929506.1	HD domain-containing protein	-
J6M00_RS08515 (J6M00_08510)	-	1747275..1747826 (+)	552	WP_153929507.1	hypothetical protein	-
J6M00_RS08525 (J6M00_08520)	comF	1748052..1748705 (+)	654	WP_153929508.1	ComF family protein	Machinery gene

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40371.22 Da
• Isoelectric Point: 6.3958

>NTDB_id=551028 J6M00_RS08500 WP_049334427.1 1743797..1744900(+) (dprA) [Riemerella anatipestifer strain 20190121E1-3]
MVNAEEILYSIALRRSSLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIVYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=551028 J6M00_RS08500 WP_049334427.1 1743797..1744900(+) (dprA) [Riemerella anatipestifer strain 20190121E1-3]
ATGGTAAATGCAGAAGAAATTTTATACTCTATTGCTTTACGGCGAAGCTCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTGAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACACATTGTTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACAGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.005	100	0.94