Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   J5V93_RS04605 Genome accession   NZ_CP072061
Coordinates   929359..930042 (+) Length   227 a.a.
NCBI ID   WP_002011351.1    Uniprot ID   R8DDT2
Organism   Bacillus mycoides strain JAS06/1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 924359..935042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5V93_RS04585 (J5V93_04585) - 925341..926987 (+) 1647 WP_002125935.1 peptide ABC transporter substrate-binding protein -
  J5V93_RS04590 (J5V93_04590) - 927018..927221 (-) 204 WP_000559981.1 hypothetical protein -
  J5V93_RS04595 (J5V93_04595) spx 927802..928197 (+) 396 WP_002011348.1 transcriptional regulator Spx -
  J5V93_RS04600 (J5V93_04600) - 928248..928922 (-) 675 WP_002030376.1 TerC family protein -
  J5V93_RS04605 (J5V93_04605) mecA 929359..930042 (+) 684 WP_002011351.1 adaptor protein MecA Regulator
  J5V93_RS04610 (J5V93_04610) - 930115..931659 (+) 1545 WP_002064255.1 cardiolipin synthase -
  J5V93_RS04615 (J5V93_04615) - 931751..932986 (+) 1236 WP_078214020.1 competence protein CoiA family protein -
  J5V93_RS04620 (J5V93_04620) pepF 933037..934863 (+) 1827 WP_002134970.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27029.17 Da        Isoelectric Point: 4.0116

>NTDB_id=550322 J5V93_RS04605 WP_002011351.1 929359..930042(+) (mecA) [Bacillus mycoides strain JAS06/1]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQVGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELH
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQVVKERALETIRNNFPPKM

Nucleotide


Download         Length: 684 bp        

>NTDB_id=550322 J5V93_RS04605 WP_002011351.1 929359..930042(+) (mecA) [Bacillus mycoides strain JAS06/1]
TTGGATATTGAAAGAATTAATGACCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGGTTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGATGATT
TCTTTATCGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTAACGAAAGCGGAGCTT
TCAAAGGATGGACAAAAGCTGGAACTACCAATAGGTGTAGACAAAATTATAGACATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTGGAAGAGGTAGAAGAACAAGTAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTTATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAATTACAT
TCATTTGAGGACCGATATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATTGATCGTATTTTAAG
TATTGTTTTAGAATATGGAGAAGAATCTACTTTAACGATTCACCGTGTAAGTGAGTATGGGAAACAGGTTGTGAAAGAGC
GTGCGCTTGAGACAATTCGCAACAATTTCCCTCCTAAAATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB R8DDT2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

54.386

100

0.546