Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   LUX31_RS18420 Genome accession   NZ_CP089312
Coordinates   4155552..4156676 (+) Length   374 a.a.
NCBI ID   WP_235475871.1    Uniprot ID   -
Organism   Streptomyces sp. GQFP     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4150552..4161676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LUX31_RS18405 (LUX31_18405) - 4151163..4152011 (+) 849 WP_235475868.1 hypothetical protein -
  LUX31_RS18410 (LUX31_18410) - 4152023..4153819 (-) 1797 WP_235475869.1 hypothetical protein -
  LUX31_RS18415 (LUX31_18415) radA/sms 4154061..4155470 (+) 1410 WP_235475870.1 DNA repair protein RadA Machinery gene
  LUX31_RS18420 (LUX31_18420) disA 4155552..4156676 (+) 1125 WP_235475871.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  LUX31_RS18425 (LUX31_18425) - 4156696..4157559 (-) 864 WP_235475872.1 hypothetical protein -
  LUX31_RS18430 (LUX31_18430) - 4157968..4158885 (+) 918 WP_235475873.1 A/G-specific adenine glycosylase -
  LUX31_RS18435 (LUX31_18435) - 4159156..4159698 (+) 543 WP_235475874.1 SigE family RNA polymerase sigma factor -
  LUX31_RS18440 (LUX31_18440) - 4159851..4160513 (+) 663 WP_235479969.1 hypothetical protein -
  LUX31_RS18445 (LUX31_18445) cseB 4160578..4161285 (+) 708 WP_235475875.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39903.62 Da        Isoelectric Point: 4.8454

>NTDB_id=550098 LUX31_RS18420 WP_235475871.1 4155552..4156676(+) (disA) [Streptomyces sp. GQFP]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFSVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAEYVLELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=550098 LUX31_RS18420 WP_235475871.1 4155552..4156676(+) (disA) [Streptomyces sp. GQFP]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCTGGCACGGCCCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCGTCGGACCTGTCCAAGATCCTGCGGGCCGGTGTCCAGCTGGTCCC
CGACCCGACGATCCCCACCGAGGAGACGGGCACCCGGCACCGCACCGCCGACCGTGTGTCGAAGCAGGTGGGCTTCTCGG
TCGTCTCCGTCTCCCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGCCAGCGCCGTGTCCTGGAGGACTCGGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTCGTCCAGCGCCTGGAGATGGTCCGCCTCATCG
CGACGGAAATCGCCGAGTACGTGCTGGAGTTGGGCACCGACGGACGCCTCCTGGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAACGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCGACCGCCAAACGCTCCCGCACGGTCGACGA
GGCGCTCGCGGAACTCGACGCCCTCAGCCACGCCGAACTCCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACGG
GCTCACCCGAGACCCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCACGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGCGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCACGGAGCGTGCGGGAGGGGCTTTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444